| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2204 |
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| Symbol | |
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| ID | 5109149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2438082 |
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| End bp | 2439017 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640503448 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187696 |
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| Protein GI | 146307231 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.587301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0241601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAAG ACCACCTAGA TGGTTTGCTC ACCTTTATTG CCGTTGCTGA GGAAAAAGGT
TTTTCTGCAG CGGCAGTGAG ACTCGGAGTA TCGCCTTCGG CGGTAAGCCA GAGCATTCGC
AACCTCGAAC AGCGTCTTGG GCTAGTGCTT TTCAACCGCA CTACCCGCAG CGTTTGCCTG
ACCGAAATCG GCGAGCGTTA TCTGGAGCGC GTGCAGCCAG CGCTCGAGCT GCTCAAATCG
GCCTCCCAGG AACTGGGCCG TGAAGCCGAT CACCCCTCAG GCCTGCTGCG GATCAACGTG
CCGCGAGCAG CCTATCTGAT CATTCTGCAA CCCGTGTTAC GGCGCTTCAT GGCGGCTTAC
CCAGAGATCA ACCTGGAAAT TCGGGTGGAG AATCTTCTGG TTGATATCGT GAGCCAGGGC
TTCGACGCAG GCATCCGCTT CGGCGACGCA GTCGAAAAAG ACATGGTTGC CATTGCTGTC
GGCCCTACGC TTCAGGCGCA GGTCATTGCC TCGCCCACTT ATCTGGTGCA GCACGGCGTA
CCGACGCATC CCCAGCAGTT GACGATGCAT AACTGCATCG GCTATCGCCA CACCACGAGC
GGCCAGATCG AGCGCTGGAA TTTTTCTCGC GGTGATGAAA AGTACGATCT GACACCGAGA
GGCAGATTGA TACTCAACGA CTCGGAAATT CTCGTGCGTG CCGCTTTGGA GGGGCTGGGA
GTTGCCTACA TGATCAACGG TTACATCGAG GCGCTGGTGG CACAGGGGCG GCTCGTGCGT
CTGCTGGCCG ATTGGAGCCC TACCCTCCCT GCCCTTCACC TCTATTACCC CGACCGTCGC
CGCGTTCCCG CAAAACTACG TGCGCTGATC GACTTTCTGC GCCACGAGCG TGACGCCACG
CATCAGCAGC AGATCGAAGC ACCGCTACTG CTCTGA
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| Protein sequence | MRQDHLDGLL TFIAVAEEKG FSAAAVRLGV SPSAVSQSIR NLEQRLGLVL FNRTTRSVCL
TEIGERYLER VQPALELLKS ASQELGREAD HPSGLLRINV PRAAYLIILQ PVLRRFMAAY
PEINLEIRVE NLLVDIVSQG FDAGIRFGDA VEKDMVAIAV GPTLQAQVIA SPTYLVQHGV
PTHPQQLTMH NCIGYRHTTS GQIERWNFSR GDEKYDLTPR GRLILNDSEI LVRAALEGLG
VAYMINGYIE ALVAQGRLVR LLADWSPTLP ALHLYYPDRR RVPAKLRALI DFLRHERDAT
HQQQIEAPLL L
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