Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2192 |
Symbol | |
ID | 5109137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2423392 |
End bp | 2423811 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503436 |
Product | hypothetical protein |
Protein accession | YP_001187684 |
Protein GI | 146307219 |
COG category | [S] Function unknown |
COG ID | [COG5579] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0454304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00267672 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGATC CGTTCGATCT GGCGCGTTTC GTCGAGGCGC AGCAGCGCGA TTATCAGCAG GCCCTCGACG AGCTGCGTGC CGGCGCCAAG CGCAGCCACT GGATCTGGTA CGTGTTTCCG CAGCTGCGCG GCCTGGGCCG CAGTGAAATG GCCGAGCACT ACGGCATCTC CGGCCTCGAC GAGGCGAGGG CCTACCTGGC GCACCCGCTG CTGGGCCCCC GCCTGGAAGA TTGTGCCCGG GCGCTGTTGC TCCATCGCGC CCGCCCGGTA CGGCAGATCA TGGGCTCGCC GGACGACCTC AAGTTGCGTT CGAGCATGAC CCTGTTCCAG GCGGCCGCAC CCCAGCAACC GCTGTTTGCC GAGGTGCTGC AGGCGTTCTA CGACGGTGAG CAGGATGCTG CGACCTTGCA GCGTCTGTAG
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Protein sequence | MNDPFDLARF VEAQQRDYQQ ALDELRAGAK RSHWIWYVFP QLRGLGRSEM AEHYGISGLD EARAYLAHPL LGPRLEDCAR ALLLHRARPV RQIMGSPDDL KLRSSMTLFQ AAAPQQPLFA EVLQAFYDGE QDAATLQRL
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