Gene Pmen_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2192 
Symbol 
ID5109137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2423392 
End bp2423811 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID640503436 
Producthypothetical protein 
Protein accessionYP_001187684 
Protein GI146307219 
COG category[S] Function unknown 
COG ID[COG5579] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0454304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00267672 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGATC CGTTCGATCT GGCGCGTTTC GTCGAGGCGC AGCAGCGCGA TTATCAGCAG 
GCCCTCGACG AGCTGCGTGC CGGCGCCAAG CGCAGCCACT GGATCTGGTA CGTGTTTCCG
CAGCTGCGCG GCCTGGGCCG CAGTGAAATG GCCGAGCACT ACGGCATCTC CGGCCTCGAC
GAGGCGAGGG CCTACCTGGC GCACCCGCTG CTGGGCCCCC GCCTGGAAGA TTGTGCCCGG
GCGCTGTTGC TCCATCGCGC CCGCCCGGTA CGGCAGATCA TGGGCTCGCC GGACGACCTC
AAGTTGCGTT CGAGCATGAC CCTGTTCCAG GCGGCCGCAC CCCAGCAACC GCTGTTTGCC
GAGGTGCTGC AGGCGTTCTA CGACGGTGAG CAGGATGCTG CGACCTTGCA GCGTCTGTAG
 
Protein sequence
MNDPFDLARF VEAQQRDYQQ ALDELRAGAK RSHWIWYVFP QLRGLGRSEM AEHYGISGLD 
EARAYLAHPL LGPRLEDCAR ALLLHRARPV RQIMGSPDDL KLRSSMTLFQ AAAPQQPLFA
EVLQAFYDGE QDAATLQRL