| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2189 |
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| Symbol | |
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| ID | 5109529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2419870 |
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| End bp | 2421369 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503433 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001187681 |
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| Protein GI | 146307216 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.199182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00899301 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCTCG GGAAGGCTGC GCCACAGGTG GTGTTCCTGC CGCTGGGAAC GCCGGAGGAG
GGAGCCAGCC TGCAGGGCTG GCTGTACGAG TCGCTGCGCC GCGCGATTCT CGGTGGCCGT
CTGCCGGCAG GCAGCAAGCT GCCCAGCACA CGCGCCATGG CCGAGCACTA CGGCCTGGCC
CGCGGCACGG TGCAGGCGGC CTATCAACAG CTACTTTCCG AAGGCTACCT GCAGGCACGC
ACCGGCAGCG GGACGCGGGT CAGCGAGGTG CTGCCGGACC CGACGCTGAA TGCGGGCTAC
GTTCGGCGCA AGGTGGTCGC CAAGGAGGAA GAGCAGCGCG TCGCCCCCGA AACGCCCTGG
CTGAAGCGCC TGGCCGAGAT CGAGCCGATC TTCTCTCGGC GAACGTTGCC AACCGGCCAG
CGCCCGTTCT TTCCTCACCG TGGCGACATC GAGGCCTTTC CCATCGACCT GTGGCGCAAG
CTGCACACGC AGCAACTGCG CAGCTCGCGC TTGTCGATGC TGCTCGATTC GGATCCGGCG
GGCTTGCCCG AGCTGCGCGA GGCCATCGCC GGCTACCTGG CCATCGCCCG TGGGGTACAG
GTTTCGCCGC AGCGCATTCT GGTGCTCGGC AGCGTGCAGC AAGGTCTGGA TATCTGCCTG
CGCTTGCTGA CACCAGGCGA CTCTCAGGTG TGGATGGAAG ACCCGGGTTA TCCCGGCGCG
CGGCAGTTGA TGGACATCTC CGGTATCCGC CGCGTGGACG TGCCAGTGGA CCGAGCCGGC
ATGCAGGTGG AAGAGGGCAT GCGCTTGGCG CCTGGCGCGC GCCTGGCCTA CGTCACGCCC
TCACGCCAGG CACCACTGGG TGGTGAGCTG TCGCCGGCGC GGCGCCTGGC CTTGCTGAAA
TGGGCGGCAG AGCAGGGCAG CTATATCTTC GAGGACGACT ACGACAGCGA GTACCGCTTC
ATCGCCAAAC CCATTCCGGC GTTGCGCTCC ATGCCGGGCG CCGAGCACTC GGTGATCCTG
GCCGGCACGT TCAGCAAGCT GCTGTTTCCG GCCATTCGCC TGGCCTACCT GGTGCTGCCT
GAACATCTGA CGGAGAGTTT CACCCGCGCG GCGGCGCTGA TGTCGCGCCA TGCCAATAGC
CTGGCCCAGG CAGTGCTGGC CGACTTCATT CATGAGGGGC ATTTCGATCG TCACGTGCGG
CGTATGCGCA AGGTCTATGC ATCGCGGGCC GATGCCTTCG CCGAGGCTGC GCACAAGCAC
TGGCAAGGGT TGATCGAGGT GCCGGAAATT CGCGCGGGCA TGGATATCGC CTGCCATTTG
CAGGTCGAGA ACGAGCGGGA GGCTTTTGCC CGTTTGCAGG CGGCCGGCAT CGATGCCTTG
CCGCTGTCGC AATACTGCGT CGGGGCCAGA GCACCGGGCT TGGTGATGGG CTTCGCGCCC
TATGCGGAAT CTGCCATCGA GGATGCCGCC AGGGCCGTTG CGCAAGCCCT GCGCGGCTGA
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| Protein sequence | MPLGKAAPQV VFLPLGTPEE GASLQGWLYE SLRRAILGGR LPAGSKLPST RAMAEHYGLA
RGTVQAAYQQ LLSEGYLQAR TGSGTRVSEV LPDPTLNAGY VRRKVVAKEE EQRVAPETPW
LKRLAEIEPI FSRRTLPTGQ RPFFPHRGDI EAFPIDLWRK LHTQQLRSSR LSMLLDSDPA
GLPELREAIA GYLAIARGVQ VSPQRILVLG SVQQGLDICL RLLTPGDSQV WMEDPGYPGA
RQLMDISGIR RVDVPVDRAG MQVEEGMRLA PGARLAYVTP SRQAPLGGEL SPARRLALLK
WAAEQGSYIF EDDYDSEYRF IAKPIPALRS MPGAEHSVIL AGTFSKLLFP AIRLAYLVLP
EHLTESFTRA AALMSRHANS LAQAVLADFI HEGHFDRHVR RMRKVYASRA DAFAEAAHKH
WQGLIEVPEI RAGMDIACHL QVENEREAFA RLQAAGIDAL PLSQYCVGAR APGLVMGFAP
YAESAIEDAA RAVAQALRG
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