| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2188 |
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| Symbol | |
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| ID | 5109528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2418544 |
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| End bp | 2419833 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503432 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001187680 |
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| Protein GI | 146307215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0427508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00818548 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCAAT ACCTTGATCC AAGCCAGCGG CAGAATCCTT TCCGTAGTCA GCCAACACCT
TCACTCACTA CGGGAAATCA CAACGTGAAA CAGCAAATCC TGATCATTGG TGCCGGCTTC
GCCGGCATGT GGAGTGTCCT GAGCGCCATC CGCCTGCTGG ACCAGCACAA ACGCCTGGAT
GTGGACGTCA CCCTGCTTGC CCCACAGGCC GAGCTGCGCG TGCGTCCGCG CTTCTACGAG
GCCGACGTTT CCACCGCCGT AGCCCCGCTC GGGCCACTGT TCGATGCGGT CGGCGTGCGG
TTCGTGCCGG GCAGCGCCAC CCGCATCGAT GCGGCGGGCA AGCGGGTCAT CTATCGCGGC
GCAGGCGGCG CCCAGGCCGA ACTGAGCTTC GACAGGCTGA TCCTGGCGTC CGGCAGCCAG
GTGGCGCGCC CGCCGCTGGC TGGCATCGAT CGCTTCGCCT TCGATGTCGA CAGCCTCGAG
TCGGCGCAAA GGCTCGAAGC CCATCTGCAG GGCCTGCGCC ACAAGCCGGC CAGCCAGGCG
CGTAATACCG TGGTGGTGGT CGGTGGCGGT TTCACCGGTA TCGAAACGGC CACGGAGATG
CCGGCGCGGC TGCGCGCCAT TCTGGGTGAC GAGGCCGACC TCCACGTCAT CGTCGTCGAC
ATGGGCAAAC AGGTCGGCAG CGTCATGGGC GAGCAGATCG CCTCGGTGAT CGCCGAAGCC
AGTGACACGC TGGGTGTGAC CTGGAAGCTG GGCAGCCCGG TGTCGATGGT CGACGCTCAA
GGCGTGCAGC TCGACAACGG CGAACGCATC GAGGCCCATA CCGTGATCTG GACCGTGGGG
GTGAAAGCCT CGCCACTGAC CCAGCACGTC GACGGCGAGC GCGATGCCTT CGGCCGCCTG
CACGTCGACC GCAACCTGAA GGTACTGGGC CAGGACGTCA TCTATGCCAC GGGCGATACC
GCGTATGCCG CAGTGGATGA CCATGGCAAC CACGCGCTGA TGACCTGCCA GCACGCCATC
GCCCTCGGTC GCTCGGCCGG CAACAACGCC GCGGCGGATC TGCTCGGTGT CGAGCCGATT
CCCTACAGTC AACCCAAGTA CGTCACCTGC CTGGACCTCG GCGCCTGGGG CGCGGTATTC
ACCGAAGGCT GGGAGCGCAA GGTGATGCTG ACGGGCAAGG AAGGCAAGGA GCTCAAGACC
CAGATCAACA CCCAGTGGAT CTATCCGCCA CAAGCCGAGC GTGCCGTCGC CCTGGCCGCG
GCCGACCCGT TGATTCCGGT GGTGGCTTGA
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| Protein sequence | MDQYLDPSQR QNPFRSQPTP SLTTGNHNVK QQILIIGAGF AGMWSVLSAI RLLDQHKRLD
VDVTLLAPQA ELRVRPRFYE ADVSTAVAPL GPLFDAVGVR FVPGSATRID AAGKRVIYRG
AGGAQAELSF DRLILASGSQ VARPPLAGID RFAFDVDSLE SAQRLEAHLQ GLRHKPASQA
RNTVVVVGGG FTGIETATEM PARLRAILGD EADLHVIVVD MGKQVGSVMG EQIASVIAEA
SDTLGVTWKL GSPVSMVDAQ GVQLDNGERI EAHTVIWTVG VKASPLTQHV DGERDAFGRL
HVDRNLKVLG QDVIYATGDT AYAAVDDHGN HALMTCQHAI ALGRSAGNNA AADLLGVEPI
PYSQPKYVTC LDLGAWGAVF TEGWERKVML TGKEGKELKT QINTQWIYPP QAERAVALAA
ADPLIPVVA
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