| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2186 |
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| Symbol | |
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| ID | 5109526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2415669 |
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| End bp | 2416538 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503430 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187678 |
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| Protein GI | 146307213 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0548516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0213407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGC TTTCCGAGTT CTTTGAACGT ACCACTTTGC AAGGGCGTCT GTTCTTTGCA
GGCGCGGTTG AAGGGACCTT GGTGCTGGAC AAACCACCTG GCATGGCGTT TATCCATGTG
ATCGAGCGCG GCGGGGTGGA CATGGTCCAG CCTGGTCTGC CTCGTGTCGC CATCAACGAA
CCCAGCGTGC TGTTCTGCCC CAGCACCTGT TGCTACCAGT TGCACGTGCG TGACCCCGCT
GGCCTTGAAC TGATCTGCGC CTCGTTCCAG TTCGGGCGTA GCGGTCAACA GCCTTTCCCT
CTGGGGCTGC TGGAGACCCT GGTGTTTCCC CTGGCCGCCC TGGAGCAGCT AGGCCCGGTG
ATCGCCACCC TGGTCAACGA GTTCCGCAAT CCGGCACCGG GCCGCAGCAA GGCGCTCAAT
CTGTTGTTCG AATACGTCTT CGTGCTGCTG GTGCGCCGTG CGGTCAACCA GGGGCGGATC
ACCAGCGGCT TGCTCTTCGC TCTGCAGGAT GGCCGACTCG GGCCGGCGCT GCTCTGCATT
CACCAGGAGC CGGCGATACA GTGGAGCGTG GAGCGCCTGG CGGATCTGGC GAAGATGTCG
CGCTCGAAGT TCGCCGCTTT GTTTTCCGAG GTAATGGGCA TGGCGCCCAT GGCCTACGTC
ACCGCGTGGC GCATGAAGGT GGCGCAGGAC ATGATGCGCG ACGGTGTGCC GATCAAGATC
GTTTCCGATG CGGTCGGCTA CAGCTCGCAG GCTTCGTTCT CGCGAACCTT CGCGCAGCAG
GTCGGCCTGC CGCCGGGTGA ATGGCTACGC CAGGCCGTCC ACGAGCCGCC ACCGCAGCTG
TCGGCGCGAA TCTACCGCAA CTGGCCGTGA
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| Protein sequence | MDVLSEFFER TTLQGRLFFA GAVEGTLVLD KPPGMAFIHV IERGGVDMVQ PGLPRVAINE
PSVLFCPSTC CYQLHVRDPA GLELICASFQ FGRSGQQPFP LGLLETLVFP LAALEQLGPV
IATLVNEFRN PAPGRSKALN LLFEYVFVLL VRRAVNQGRI TSGLLFALQD GRLGPALLCI
HQEPAIQWSV ERLADLAKMS RSKFAALFSE VMGMAPMAYV TAWRMKVAQD MMRDGVPIKI
VSDAVGYSSQ ASFSRTFAQQ VGLPPGEWLR QAVHEPPPQL SARIYRNWP
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