Gene Pmen_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2163 
Symbol 
ID5109503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2389495 
End bp2389731 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content67% 
IMG OID640503407 
Producthypothetical protein 
Protein accessionYP_001187655 
Protein GI146307190 
COG category[S] Function unknown 
COG ID[COG3813] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.162616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.033863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC TACGCCCGAA CTGCGAGTGC TGCGACCGAG ACCTGCCGGC GAACAGCGCA 
GACGCGTTGA TCTGCTCCTT CGAGTGCACC TTCTGCCGCA GCTGCGCCGA GAACAAACTC
GCGTTGCACT GCCCCAACTG CGGCGGCGAG CTTCTGCGCA GGCCGATCCG CCCCGCGCAG
ATGCTCGCGC GCAACCCGGC CTCCAGCGTT CGCGTAGGGA GGGGTTCGCC ATGCTGA
 
Protein sequence
MLELRPNCEC CDRDLPANSA DALICSFECT FCRSCAENKL ALHCPNCGGE LLRRPIRPAQ 
MLARNPASSV RVGRGSPC