| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2153 |
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| Symbol | |
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| ID | 5109493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2375389 |
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| End bp | 2376816 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503397 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001187645 |
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| Protein GI | 146307180 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.518095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.441318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGA CGGAGGTGCG GATGAACCCC TGGCGCAACA TCAGCCTGTG GATGGATCAG
CTCGAGGAGC CGCTGCAGCC GCGCGCCAGT TTGCAGGGCG ACCTGCAGGC GGATGTGGTG
GTTGTCGGCG CCGGCTATAC CGGACTGTGG ACGGCCTACT ACCTCAAGCG TCAGGCGCCC
CAGCTACAGG TGGTGATACT GGAGGCGGAG ACTGCCGGTT TCGGCGCCTC CGGGCGCAAT
GGCGGCTGGC TGATGGGCAA TCTGCTGGGT GAGGATCGCC TGCTGGCGGG CTTGCCGACT
GCCGAGCGCA AGGCCGCTTT CGAGCTGCTG CATGGCATCC CTGACGAAGT GGCCGCAGTG
GCGAGCCGCG AAGGCATCGA TTGCGAACTG CAAAAGGGTG GGGTGCTTTA CTGCGCGGCC
CGCTATCCCG AGCAGGAAGC CCGACTGCGT GAATACCTCG GGGAATTGCG TGCGCTCGGC
TTGAGCGAAG ACGATTATCG ATGGCTGGCG CCGAACGAAC TGGCCGAGCA GTTGCGCGTG
GCCAATGCCT ACGGCGCGCT CTACAGCCCG CACTGCGCGA CCATCCAGCC GGCCAGGCTG
GCCCGTGGCT TGGCGCGCTG TGTCGAAGGG CTGGGCGTCG AGCTGTACGA GCGCAGCCCG
GTGATCGATT GGCAGCCGGG CCAGGTGCGC ACAGCGCACG GTCGCGTCAC GGCAGACTGG
GTGGTGCCGG CCATCGAAGG CTACGCCGCT ACTCTGGCGC CCTTGGGCAA TCACCAGTTG
CCGGTACAGA GTCTGATCGT CGCCACCGAG CCGCTGCCGG CGGATGTCTG GGCCGGTATC
GGCCTGGAGC GTGGCCAGGC CTTCAGCGAG CTCAGCCGGC AGGTTACCTA CGGTCAGCGC
AGCCGCGATG ATCGCCTGAT CTTCGGCGCT CGCGGTGGCT ACCGTTTTGG CGGACGCCTG
CGCAGCGATT TCAACCTGAC CGAAGACGAG CTCGGCCTGC GCCGTTACCT GATGGCCGAG
CTCTTCCCGC AACTGCGCAA CGTGCGCTTC ACCCATTCCT GGGGCGGCAA TCTGGGCATG
GCGCGGGGCT TCCAGCCGCA CATGCTGCGC GATACGCGCA ACCGCATCGC CCTGGCCGGC
GGCTACGGTG GCGAGGGCGT GGGCGCCAGC AACCTTGGCG GGCGGACCCT GGCCGATCTC
ATCCTCGGCC GCGACAGCCT GCTGTTGCGC CAGCCCTGGG TACATCCCGA CAGCCCGGTT
GCCAGCCTGC GCCGCTGGGA GCCGGAACCC TGCCGCTGGC TGGGCTACAA CGCCATCATC
CGCAGCTTCG TGCATGAGGA CAGGGTGCTG GCCGACCCGC GCAGCCCGGC CTGGCGTCGG
TGTCTGGCGC AGACGCTGGC CGGGCGCATG GAAAGCCTGA TGAAGTGA
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| Protein sequence | MDMTEVRMNP WRNISLWMDQ LEEPLQPRAS LQGDLQADVV VVGAGYTGLW TAYYLKRQAP
QLQVVILEAE TAGFGASGRN GGWLMGNLLG EDRLLAGLPT AERKAAFELL HGIPDEVAAV
ASREGIDCEL QKGGVLYCAA RYPEQEARLR EYLGELRALG LSEDDYRWLA PNELAEQLRV
ANAYGALYSP HCATIQPARL ARGLARCVEG LGVELYERSP VIDWQPGQVR TAHGRVTADW
VVPAIEGYAA TLAPLGNHQL PVQSLIVATE PLPADVWAGI GLERGQAFSE LSRQVTYGQR
SRDDRLIFGA RGGYRFGGRL RSDFNLTEDE LGLRRYLMAE LFPQLRNVRF THSWGGNLGM
ARGFQPHMLR DTRNRIALAG GYGGEGVGAS NLGGRTLADL ILGRDSLLLR QPWVHPDSPV
ASLRRWEPEP CRWLGYNAII RSFVHEDRVL ADPRSPAWRR CLAQTLAGRM ESLMK
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