| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2143 |
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| Symbol | |
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| ID | 5109483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2363823 |
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| End bp | 2364602 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503387 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001187635 |
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| Protein GI | 146307170 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.122833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.469239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGAT TGCCGCCGAG CGACGAAATG CAGATGCTCG ATGAGGTGTT GCTGGCCGAA
GTGCGCGATG CCTTCGGTGT GATCCGCGTG GTGCAGATCG GCGCCTATCG CTTTCTCGAG
TTCGGTGACG CCATCGAGCA GAGCTGCGTG TTCCAGGGCG ATCCGAGCTG GCTGGAGTAC
GACTACACCC GCGCCATGCT GCTCGGTGCC CTGTGCCACG ACGCGCCGGA AACGGCGCTG
TTTCTCGGCC TGGGCGCCGG CAACCTGACC CAGGCGTGCC TGAAGTTCCT GCCGCTGGAG
GACGTCGAGG CCATCGAACT GCGCCCGGAC GTGCCGCGCC TGGCCATGGA GTTTCTCGGC
CTGGATGACG ATCCGCGCCT GACCATCCGC ATCGGCGACG CCACCGAACT GCTCGACAGT
GCGGAAACCG CGGATCTCAT CTTCCTCGAT CTGTACACCG ATCAAGGCCC CGGCGCCGGC
CATCTGGCCT GGCGGTTTCT CGAGCATTGC CGGGAGAAGC TCAATCCCGG TGGCTGGCTG
ATCATCAACC AATGGGCCGG CAACGACGGC AAGCCGCTCG GTGCGGCGCT GCTGCGCGGC
CTGTATCACC GCCATTACTG GGAATGCCCG GTGAAGGAGG GCAACGTGGT ACTGCTGATA
CCCGCCGATC TCGACCAGCC GCTCGATCTT GGCCGCCTGC AGATGCGAGC CGGCGAGCTG
GCACCGCGCC TCGGCTATTC GCTGCAGCCG CTGATCGAGG CGCTGCGTCC GGCTACCTGA
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| Protein sequence | MPGLPPSDEM QMLDEVLLAE VRDAFGVIRV VQIGAYRFLE FGDAIEQSCV FQGDPSWLEY
DYTRAMLLGA LCHDAPETAL FLGLGAGNLT QACLKFLPLE DVEAIELRPD VPRLAMEFLG
LDDDPRLTIR IGDATELLDS AETADLIFLD LYTDQGPGAG HLAWRFLEHC REKLNPGGWL
IINQWAGNDG KPLGAALLRG LYHRHYWECP VKEGNVVLLI PADLDQPLDL GRLQMRAGEL
APRLGYSLQP LIEALRPAT
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