Gene Pmen_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2142 
Symbol 
ID5109482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2362357 
End bp2363685 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content66% 
IMG OID640503386 
Productflavin-containing monooxygenase 
Protein accessionYP_001187634 
Protein GI146307169 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.23479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.438077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCCA TCATAGGTGC CGGCCCGATG GGGCTGTGCG CGGCCCGGCA ACTGAAGAGG 
CACGGCATCG ATTTCGTCGG CTTCGAACTG CACAGCGATG TCGGCGGCCT GTGGGACATC
GACAACCCGC ACAGCACCAT GTACCACTCG GCGCACCTGA TTTCCTCCAA GGGCACCACC
GAGTTTCGCG ACTTCCCCAT GCGCGCCGAA GTGGCGCCCT ACCCGCATCA CAGCGAAATG
CGCCGCTACT TTCGCGACTA TGCACGGCAG TTCGGCCTTT ACCAGCACTA CCAGTTCGAC
ACCCGCGTGG TGCAGCTGCA ACGCCTGGAC AAGGGCTGGA CGCTGATCAG CGAGCGCAAC
GGCGAACAGC GCGAATGGCG CTTCGATGGC GTTCTGATCG CCAACGGCAC CCTGCATACG
CCCAACCTGC CACCCCTGCC CGGCCACTTC GCCGGTGAGG TGCTGCACTC CAGTGCCTAC
AAGAGCGCCG ATATCTTCGC CGGCAAACGC GTGCTGGTGG TCGGCTGCGG CAACTCGGCC
TGCGATATCG CGGTCGATGC CGTGCATCGC GCCGCCTCGG TGGATCTTTC GGTACGGCGC
GGCTACTACT TCCTGCCCAA GTTCATTCTC GGCAAGCCCA CCGACACCTT CGGCGGAGCG
ATCAGGTTAC CGCGCCGGCT CAAGCAGCTG CTCGATGGCC TGCTGGTGCG CGCTCTGGTC
GGCAAGCCTT CGCAGTACGG CCTGCCCGAT CCTGACTATC GCCTGTATGA ATCGCACCCG
GTGATGAACT CGCTGGTGCT GCACCATATC GGCCATGGCG ATATCCGCGT GCGCGGCGAT
ATCACGGCGG TGGACGGCCA CAGCGTCACC TTCGCCCATG GCGCACGGGC CGAGTACGAC
CTCATCCTGC TGGCCACCGG CTACAAGCTC GACTATCCCT TCATCGAGCG CAGCGAGCTG
AACTGGCCGG AGGGCGCAGG CGCGCCGCAG CTGTATCTCA ACGTCTTCCA CCCGCAGCGT
GACGACCTGT TCGTGCTCGG CATGGTCGAG GCCTCCGGCC TCGGCTGGCA GGGGCGCGAC
GAGCAGGCCG AACTGGTAGC TCTGTACATC CGCCAGTTGC AGGCCCGCAG CCCGGCGGCA
CAGGCTCTGC ACCAGACCAT CCGCGAGCAG GCCGGCCAGC GCCTGGATGG CGGCTACCGC
TACCTGCCAC TGGAGCGCAT GGCCTACTAC GTGCACAAGG ACAGCTATCG TAGACGCATC
GCCGCGCACA GTGCCGTCCT GCGGCGCGAG CTGAGCGAAA CGGCCTACGC GGCCACACAG
GGAGCCTGA
 
Protein sequence
MYAIIGAGPM GLCAARQLKR HGIDFVGFEL HSDVGGLWDI DNPHSTMYHS AHLISSKGTT 
EFRDFPMRAE VAPYPHHSEM RRYFRDYARQ FGLYQHYQFD TRVVQLQRLD KGWTLISERN
GEQREWRFDG VLIANGTLHT PNLPPLPGHF AGEVLHSSAY KSADIFAGKR VLVVGCGNSA
CDIAVDAVHR AASVDLSVRR GYYFLPKFIL GKPTDTFGGA IRLPRRLKQL LDGLLVRALV
GKPSQYGLPD PDYRLYESHP VMNSLVLHHI GHGDIRVRGD ITAVDGHSVT FAHGARAEYD
LILLATGYKL DYPFIERSEL NWPEGAGAPQ LYLNVFHPQR DDLFVLGMVE ASGLGWQGRD
EQAELVALYI RQLQARSPAA QALHQTIREQ AGQRLDGGYR YLPLERMAYY VHKDSYRRRI
AAHSAVLRRE LSETAYAATQ GA