| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2141 |
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| Symbol | |
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| ID | 5109481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2361422 |
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| End bp | 2362354 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503385 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_001187633 |
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| Protein GI | 146307168 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.219683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.403817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACCGG TGACGATCGC CTTCGACCCC AGCAGCCTGG TGCTGATCAA TCTGATCGTC
GCGCTGATGA TGTTCGGCGT TTCTCTCGAT CTGCGCGCCG AGGATTTTCG CCGCATCGCT
CGCACGCCAC GCGCCCCGTT GCTCGGGCTG CTGGCGCAGT TCCTGCTGTT GCCGGCGCTG
ACCTGCCTGG CCTGTTGGGG TCTGGGCATC CAGCCGGAGC TGGCCCTGGG CATGATGCTG
ATCGCGGCCT GCCCCGGCGG CAGCTTTTCC AACATCATGA CCTGGCTGGC GCGGGGCGAC
GTCGCGGTCT CGGTGAGCAT GACAGCGGTA TCCAGCCTGG CCGCCAGCCT GCTCACGCCG
CTGAATTTCG CCCTGTACGC CTGGCTCAAC CCCTACACGC GGCCGCTGCT GACGCAGATC
GCCCTCGACC CGCTGGGTTT GCTCGCGCTC GTGCTGCTGG TGCTGGCCCT GCCACTGCTG
GCAGGCATGT GGGTGGGGCG GCGCTTGCCA CGCCTCGCGC AGCACCTGGA AAAACCCCTG
CGCCTGTTCG CCCTGCTGGT GATGCTGGGT TTCGTCGCCC TGGCGTTCAG CCGCAATCTG
GAACAGTTCA CCCGCCACTT TCACCTGTTC TTCTGGCTGG TGGTGGCGCA CAACGCGCTG
GCGCTGGGCA TCGGCTATCT CAGCGCACTG ATCGGCGGGC TACCGGCAGG CGAGCGCCGC
GCCGTGACCC TGGAAGTGGG CATTCAGAAC TCGGCGCTGG GCCTGGTGAT CATCTTCACC
TTCTTCCCCC AGGCCGGCGG CATGCTGCTG ATCGCCGCCT TCTGGGGCTG CTGGCACCTG
GTGTCGGGCC TGGCCCTGGC ATGGCTCTGG TCGCGCCGCC CACCCGAGCC CGCGCCGCTG
CCGCTCGCGC AGCCCGGCCT CAGGGACGAG TGA
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| Protein sequence | MEPVTIAFDP SSLVLINLIV ALMMFGVSLD LRAEDFRRIA RTPRAPLLGL LAQFLLLPAL
TCLACWGLGI QPELALGMML IAACPGGSFS NIMTWLARGD VAVSVSMTAV SSLAASLLTP
LNFALYAWLN PYTRPLLTQI ALDPLGLLAL VLLVLALPLL AGMWVGRRLP RLAQHLEKPL
RLFALLVMLG FVALAFSRNL EQFTRHFHLF FWLVVAHNAL ALGIGYLSAL IGGLPAGERR
AVTLEVGIQN SALGLVIIFT FFPQAGGMLL IAAFWGCWHL VSGLALAWLW SRRPPEPAPL
PLAQPGLRDE
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