| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2140 |
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| Symbol | |
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| ID | 5109480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2359957 |
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| End bp | 2361342 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503384 |
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| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
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| Protein accession | YP_001187632 |
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| Protein GI | 146307167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.239796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.371395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCA GCCCGAATCA GCCGATACAG AGATGCCGCA TGTCGCACGC CTGGAGCCCA
GAAAGCTGGA GGGCCAAGCC CATCCAGCAG CAGCCCGAAT ACCCTGACGC CGCCCACCTC
GCCCGCGTCG AACAGACCCT GGCCGGCTAC CCGCCGCTGG TGTTCGCCGG CGAGGCGCGC
GAGCTGCGCC GCCAGTTCGC CGAAGTCACC CAGGGCCGCG CCTTCCTGCT GCAAGGCGGC
GACTGCGCCG AGAGCTTCGC CGAGTTTTCC GCCGCGAAGA TCCGCGACAC CTTCAAGGTG
TTGCTGCAGA TGGCCATCGT CATGACCTTC GCCGCCGGCT GTCCGGTGGT CAAGGTCGGG
CGCATGGCCG GCCAGTTCGC CAAGCCGCGC TCGTCCGGCA GCGAAACCAT CGATGGCGTC
ACCCTGCCCG CCTACCGCGG CGATATCGTC AACGGCATCG GCTTCGACGC CGCCAGCCGC
GTGCCCGATC CGGAGCGCCT GCTGCAGGCC TATCACCAGG CCACCGCCAG CCTCAACCTG
CTGCGCGCCT TCGCCCAGGG TGGTTTCGCC GACGTGCATC AGGTGCATCA GTGGAACCTC
GATTTCATCG CCAACTCGGC GCTCTCCGAG AAGTACCACC AGCTGGCCAA CCGCATCGAC
GAAACCCTGG CGTTCATGCG CGCCGTCGGC ATGGACAGCG CGCCGCAACT GCGCGAAGTC
AGCTTCTTCA CCGCCCACGA AGCGCTGCTG CTCAACTACG AAGAAGCCTT CGTGCGTCGC
GACAGCCTCA CCGGCCGCTG GTACGACTGC TCCGCGCACA TGCTGTGGAT CGGCGACCGC
ACCCGCCAGC TGGACGGTGC GCACGTCGAA TTCATGCGAG GCATCGAGAA CCCCATCGGC
GTCAAGGTCG GCCCGAGCAT GGACCCGGAC GAGCTGATCC GCCTGCTCGA CACGCTCAAC
CCGGACAACG ATCCAGGCCG CCTCAACCTG ATCGTGCGCA TGGGCGCGGA CAAGGTGGAA
GCGCACTTCC CGCGCCTGCT GCGCAAGGTC AAGGAAGAAG GCCGCCAGGT GCTGTGGAGT
TCCGACCCCA TGCACGGCAA CACCATCAAG GCCAGCAGCG GCTACAAGAC CCGCGACTTC
GCGCAGATCC TCAGCGAAGT CCGGCAGTTC TTCGCCGTGC ACCAGGCCGA AGGCACATAC
GCCGGCGGCA TCCATATCGA GATGACCGGG CAGAACGTCA CCGAATGCAT CGGCGGCTCG
CGCCCGATCA CCGAAGACGG TCTGTCCGAC CGCTACCACA CCCATTGCGA CCCGCGCATG
AACGCCGACC AGTCGCTGGA GCTGGCCTTC ATGATCGCCG AGACGCTGAA GCAGGTACGC
CGCTGA
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| Protein sequence | MPTSPNQPIQ RCRMSHAWSP ESWRAKPIQQ QPEYPDAAHL ARVEQTLAGY PPLVFAGEAR
ELRRQFAEVT QGRAFLLQGG DCAESFAEFS AAKIRDTFKV LLQMAIVMTF AAGCPVVKVG
RMAGQFAKPR SSGSETIDGV TLPAYRGDIV NGIGFDAASR VPDPERLLQA YHQATASLNL
LRAFAQGGFA DVHQVHQWNL DFIANSALSE KYHQLANRID ETLAFMRAVG MDSAPQLREV
SFFTAHEALL LNYEEAFVRR DSLTGRWYDC SAHMLWIGDR TRQLDGAHVE FMRGIENPIG
VKVGPSMDPD ELIRLLDTLN PDNDPGRLNL IVRMGADKVE AHFPRLLRKV KEEGRQVLWS
SDPMHGNTIK ASSGYKTRDF AQILSEVRQF FAVHQAEGTY AGGIHIEMTG QNVTECIGGS
RPITEDGLSD RYHTHCDPRM NADQSLELAF MIAETLKQVR R
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