Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2137 |
Symbol | |
ID | 5109477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2357417 |
End bp | 2358610 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640503381 |
Product | hypothetical protein |
Protein accession | YP_001187629 |
Protein GI | 146307164 |
COG category | [S] Function unknown |
COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.387118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.200315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCT CACTTTCTCT CGCCGAAGCG CGCCGCCTGG CCCTGGCTGC TCAGGGGTTC GGCCGCACCC CGCGCGGCGC CATCGCCCAC CGGCACTTGC AGGCGCAGAT CGAACGCCTC GGCGTGCTGC AGATCGATTC GGTCAACGCC TTGGTGCGTT CGCATTACCT GCCGGCGTTT TCCCGCCTTG GCCACTACCA GGCCGAGCAC CTCGACGAAC TGGCCTGGGG CCGGGCGCGC CGTCGGCGCC TGTTCGAGTA CTGGGGACAC GAGGCTTCGC TGTTGCCGCT GGAACTCTAT CCGCTGCTGC GCTGGCGCAT GCGCCGGGCC GCCGATGGCC AGGGCATCTA CCCGGGGCTG GCGCGCTTCG GCGTGGAGCG GCGCGACGCC ATAGAGACCG TGCTGCAGGC CGTGCGCGAG CGCGGTGCGC TGGGCGCCGG CAGTCTGTCC AGTCGTACCG AGAAGGCCGG CCCCTGGTGG GACTGGAGTG CGGAAAAGAT GGCGCTGGAG TGGCTGTTCG CCGCAGGCCT GGTGACGGTG GCCGGACGCC GCGGTTTCGA GCGTCTGTAC GATCTGCCGG AGCGGGTCAT CCCCGCAGAT GTGCTGAATC ACCCGGACCT CGATGAGGAC GAGGCGCAGC GGCGCCTGTT GCTGCGTTCG GCCGATGCGT TGGGCGTGGC GACGGAGAAG GATCTGCGTG ACTACTACCG GCTCGATGCC GGCGACAGCA AGCGACGCAT CGCCGAGCTG GTGGAGGCGG GCGAGCTATT GCCGGTCGCA GTGCAGGGCT GGCGGCAGCC GGCCTACTGT CGGGGCGAGC CGCGCGTACC TCGGCGCATC CGTCACAGTG CGCTGCTGTC GCCGTTCGAT TCACTGATCT GGGAACGCGA GCGCACCGAG CGGCTGTTCG GCTTCCGCTA CCGCCTGGAG ATCTATACCC CGCAGGCCAA GCGCGTATAC GGCTATTACG TGCTGCCCTT CCTGCATCAC GAGCGCCTGC TGGCGCGGGT GGACCTGCGC AGCGAGCGCG CGGCCGGGCG CCTGGCGGTG CATGCCGTGC ATCTGGAAGA AGCGGTGTTG AGCGAGGAGG CGCGCCTGGC GATGGGCGAT TCGCTGCGTG CGCTGGCGCA CTGGCTGGGG CTGGAGCAAG TGTGGCTGGC GCCGAGCGTC AGCCTGCGCG GGCAGCTCGG CTAA
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Protein sequence | MTLSLSLAEA RRLALAAQGF GRTPRGAIAH RHLQAQIERL GVLQIDSVNA LVRSHYLPAF SRLGHYQAEH LDELAWGRAR RRRLFEYWGH EASLLPLELY PLLRWRMRRA ADGQGIYPGL ARFGVERRDA IETVLQAVRE RGALGAGSLS SRTEKAGPWW DWSAEKMALE WLFAAGLVTV AGRRGFERLY DLPERVIPAD VLNHPDLDED EAQRRLLLRS ADALGVATEK DLRDYYRLDA GDSKRRIAEL VEAGELLPVA VQGWRQPAYC RGEPRVPRRI RHSALLSPFD SLIWERERTE RLFGFRYRLE IYTPQAKRVY GYYVLPFLHH ERLLARVDLR SERAAGRLAV HAVHLEEAVL SEEARLAMGD SLRALAHWLG LEQVWLAPSV SLRGQLG
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