Gene Pmen_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2137 
Symbol 
ID5109477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2357417 
End bp2358610 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID640503381 
Producthypothetical protein 
Protein accessionYP_001187629 
Protein GI146307164 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.387118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.200315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCT CACTTTCTCT CGCCGAAGCG CGCCGCCTGG CCCTGGCTGC TCAGGGGTTC 
GGCCGCACCC CGCGCGGCGC CATCGCCCAC CGGCACTTGC AGGCGCAGAT CGAACGCCTC
GGCGTGCTGC AGATCGATTC GGTCAACGCC TTGGTGCGTT CGCATTACCT GCCGGCGTTT
TCCCGCCTTG GCCACTACCA GGCCGAGCAC CTCGACGAAC TGGCCTGGGG CCGGGCGCGC
CGTCGGCGCC TGTTCGAGTA CTGGGGACAC GAGGCTTCGC TGTTGCCGCT GGAACTCTAT
CCGCTGCTGC GCTGGCGCAT GCGCCGGGCC GCCGATGGCC AGGGCATCTA CCCGGGGCTG
GCGCGCTTCG GCGTGGAGCG GCGCGACGCC ATAGAGACCG TGCTGCAGGC CGTGCGCGAG
CGCGGTGCGC TGGGCGCCGG CAGTCTGTCC AGTCGTACCG AGAAGGCCGG CCCCTGGTGG
GACTGGAGTG CGGAAAAGAT GGCGCTGGAG TGGCTGTTCG CCGCAGGCCT GGTGACGGTG
GCCGGACGCC GCGGTTTCGA GCGTCTGTAC GATCTGCCGG AGCGGGTCAT CCCCGCAGAT
GTGCTGAATC ACCCGGACCT CGATGAGGAC GAGGCGCAGC GGCGCCTGTT GCTGCGTTCG
GCCGATGCGT TGGGCGTGGC GACGGAGAAG GATCTGCGTG ACTACTACCG GCTCGATGCC
GGCGACAGCA AGCGACGCAT CGCCGAGCTG GTGGAGGCGG GCGAGCTATT GCCGGTCGCA
GTGCAGGGCT GGCGGCAGCC GGCCTACTGT CGGGGCGAGC CGCGCGTACC TCGGCGCATC
CGTCACAGTG CGCTGCTGTC GCCGTTCGAT TCACTGATCT GGGAACGCGA GCGCACCGAG
CGGCTGTTCG GCTTCCGCTA CCGCCTGGAG ATCTATACCC CGCAGGCCAA GCGCGTATAC
GGCTATTACG TGCTGCCCTT CCTGCATCAC GAGCGCCTGC TGGCGCGGGT GGACCTGCGC
AGCGAGCGCG CGGCCGGGCG CCTGGCGGTG CATGCCGTGC ATCTGGAAGA AGCGGTGTTG
AGCGAGGAGG CGCGCCTGGC GATGGGCGAT TCGCTGCGTG CGCTGGCGCA CTGGCTGGGG
CTGGAGCAAG TGTGGCTGGC GCCGAGCGTC AGCCTGCGCG GGCAGCTCGG CTAA
 
Protein sequence
MTLSLSLAEA RRLALAAQGF GRTPRGAIAH RHLQAQIERL GVLQIDSVNA LVRSHYLPAF 
SRLGHYQAEH LDELAWGRAR RRRLFEYWGH EASLLPLELY PLLRWRMRRA ADGQGIYPGL
ARFGVERRDA IETVLQAVRE RGALGAGSLS SRTEKAGPWW DWSAEKMALE WLFAAGLVTV
AGRRGFERLY DLPERVIPAD VLNHPDLDED EAQRRLLLRS ADALGVATEK DLRDYYRLDA
GDSKRRIAEL VEAGELLPVA VQGWRQPAYC RGEPRVPRRI RHSALLSPFD SLIWERERTE
RLFGFRYRLE IYTPQAKRVY GYYVLPFLHH ERLLARVDLR SERAAGRLAV HAVHLEEAVL
SEEARLAMGD SLRALAHWLG LEQVWLAPSV SLRGQLG