| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2130 |
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| Symbol | |
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| ID | 5109470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2352301 |
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| End bp | 2352873 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640503374 |
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| Product | translation initiation factor 5A (eIF-5A) |
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| Protein accession | YP_001187622 |
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| Protein GI | 146307157 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0576423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.464149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACTG CACAAGAAAT GAGAGTCAAC AGCGTGGCCC TGATCGATGG CCAGCCGTGG
CTGATCCAGA AGGCCGAGTT CACCAAGTCC GGTCGTAACA GCGCCATCGT CAAGATGAAG
CTGAAGAACC TGCTCAACGG TTCCAAGACC GAGACCGTCT ACAAAGCCGA CGACAAGATG
GAGCCGGTGA TTCTCGAGCG CAAGGAAGTG AACCTGTCCT ACATCAGCGG TGAGGACTAC
GTGTTCATGG ATCCGGAGTA CAACTCCTAC GAGCTGCGTG CCGAAGATCT GGAAAGCGTT
CTGCCGTTCA TCGAAGAAGG CATGACCGAC GTCTGCGAAG CCGTGTTCTT CGAAGGCAAG
GTGATCTCCG TCGACCTGCC GACCACCATC GTGCGTCAGG TTGTCTACAC CGAGAACGCT
GCTCGTGGCG ACACTTCCGG CAAGGTGATG AAGCCTGCCA AGCTGCGCAA CGGTACCGAG
ATCAAGGTTG CCGAGTTCGT CGACATCGAC GACTGGATCG AGATCGATAC CCGTGACGGT
TCCTACAAGG GCCGCACCCA GGCTCCGGCC TGA
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| Protein sequence | MKTAQEMRVN SVALIDGQPW LIQKAEFTKS GRNSAIVKMK LKNLLNGSKT ETVYKADDKM
EPVILERKEV NLSYISGEDY VFMDPEYNSY ELRAEDLESV LPFIEEGMTD VCEAVFFEGK
VISVDLPTTI VRQVVYTENA ARGDTSGKVM KPAKLRNGTE IKVAEFVDID DWIEIDTRDG
SYKGRTQAPA
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