Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2114 |
Symbol | |
ID | 5109455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2342304 |
End bp | 2343620 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640503359 |
Product | hypothetical protein |
Protein accession | YP_001187607 |
Protein GI | 146307142 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.7153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0967567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGGA CACACTTTTA TATCGCGCAG GCCTCGCTGC TGATGGCAGC GCTTTTCTTT TCAACGCTGT CCCGGGCTGA AGAGTACTTC TGGCTCACTG TCGGTGTACG CGGGGCATCG CCTTACTCGT CGTGCTCCTA CTACGCCAAT ACCACCACGA CTTCTAATCA GCCTTACATC CGCAATCTAA AAGTTACCAG GCAGACTGAA ACCTCCTTCC TCTGTAACTT TACCCTTTCC AGTTCTGCTA GCACTGGTGG TTCTCCAAAG CAGGTTGCCA CGACTCGATA TGGTGATACC TGTACGGGCA CCTATAACTC TGAAACTGGC GAGTGTGTTC CGCCTCAACC GCCGTCCGAG TGCCAGTCCA AGGCTGGCCA GCACACCACC TGGTCCATGC TGCGGCCCGA CCTCAACGGC CTCGGCTCTA TCGAATATGG GTGCGAAGCC GGTTGCCGTA TCGAACTTGG CACCTCGCAA TGCGCGCCTG TCTCCGAAGG TGCTACCACT GGCGTGTGCT GGGGCGCAGG CACCTTCACC GGCGCTGAGT GCCAGCCCGG CGACAACCCC ACCGGTGGCA CCCCGCCGAC CGATCCAACG GACCCGACCG ACCCACCGCC AGAGTGCGGC CCTGACCACT CATGGTCCGG CACCACCTGC GTGCCCGACG AGCCCAAGGA ATGCGACCCC AGCACTGGCG AAGTCTGCCC GCCCTCTGAC GGTGATGGCG ACGGCGATGA TGATGGCGAT GGAGACGACA ACGACGGAGA CGGTGATGGG GACGGTAACG GCGACGGCTC CGGTGATGGA GAAGGCGAAG GCGAGGGGGA TGGCGAAGGT GACGGGGACG GCACGGGTGG GGGCGAAGGT GAAGGCGACG ATGGCAAGTG CGACCCCAAG ACCGACCCGA ACAAGTGCGT AAAGCCCAGC GTCGAGGGCG AAGCCTGCGA TGCCGAGTTG AAGTGCGAAG GCGACGTCAT CCAGTGCGCC ATCCTGCGCG CCAACAAAAA CCAGATCTGC CAGTGGAAGT ACGACGATAA GGTCCGCAGC GATATCGCCT CCGAGCTGGC CGGCAAGGAT TACCAGCTGG AAGAGAAGTC CCTCGCCGTC AGCAGCCTGT TTACCGAAGC CGTCAACAAG GGCCGTTGGC TGCCGCAGTC CTGCCCTTCC CCGCAGAGCT TTTCCGTCAT GGGTCGCAGC TACTCGTTTA GCTGGGAACC CGCCTGCCGT TTCGCCCAAG CCATCGGCCC GCTGATTGTG GCCCTGGCTT CGATCTTCTT TGCAGTCTCC ATCGGACGCG GAATCAAGGG GTCTTGA
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Protein sequence | MRRTHFYIAQ ASLLMAALFF STLSRAEEYF WLTVGVRGAS PYSSCSYYAN TTTTSNQPYI RNLKVTRQTE TSFLCNFTLS SSASTGGSPK QVATTRYGDT CTGTYNSETG ECVPPQPPSE CQSKAGQHTT WSMLRPDLNG LGSIEYGCEA GCRIELGTSQ CAPVSEGATT GVCWGAGTFT GAECQPGDNP TGGTPPTDPT DPTDPPPECG PDHSWSGTTC VPDEPKECDP STGEVCPPSD GDGDGDDDGD GDDNDGDGDG DGNGDGSGDG EGEGEGDGEG DGDGTGGGEG EGDDGKCDPK TDPNKCVKPS VEGEACDAEL KCEGDVIQCA ILRANKNQIC QWKYDDKVRS DIASELAGKD YQLEEKSLAV SSLFTEAVNK GRWLPQSCPS PQSFSVMGRS YSFSWEPACR FAQAIGPLIV ALASIFFAVS IGRGIKGS
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