Gene Pmen_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2114 
Symbol 
ID5109455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2342304 
End bp2343620 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content62% 
IMG OID640503359 
Producthypothetical protein 
Protein accessionYP_001187607 
Protein GI146307142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.7153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0967567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGA CACACTTTTA TATCGCGCAG GCCTCGCTGC TGATGGCAGC GCTTTTCTTT 
TCAACGCTGT CCCGGGCTGA AGAGTACTTC TGGCTCACTG TCGGTGTACG CGGGGCATCG
CCTTACTCGT CGTGCTCCTA CTACGCCAAT ACCACCACGA CTTCTAATCA GCCTTACATC
CGCAATCTAA AAGTTACCAG GCAGACTGAA ACCTCCTTCC TCTGTAACTT TACCCTTTCC
AGTTCTGCTA GCACTGGTGG TTCTCCAAAG CAGGTTGCCA CGACTCGATA TGGTGATACC
TGTACGGGCA CCTATAACTC TGAAACTGGC GAGTGTGTTC CGCCTCAACC GCCGTCCGAG
TGCCAGTCCA AGGCTGGCCA GCACACCACC TGGTCCATGC TGCGGCCCGA CCTCAACGGC
CTCGGCTCTA TCGAATATGG GTGCGAAGCC GGTTGCCGTA TCGAACTTGG CACCTCGCAA
TGCGCGCCTG TCTCCGAAGG TGCTACCACT GGCGTGTGCT GGGGCGCAGG CACCTTCACC
GGCGCTGAGT GCCAGCCCGG CGACAACCCC ACCGGTGGCA CCCCGCCGAC CGATCCAACG
GACCCGACCG ACCCACCGCC AGAGTGCGGC CCTGACCACT CATGGTCCGG CACCACCTGC
GTGCCCGACG AGCCCAAGGA ATGCGACCCC AGCACTGGCG AAGTCTGCCC GCCCTCTGAC
GGTGATGGCG ACGGCGATGA TGATGGCGAT GGAGACGACA ACGACGGAGA CGGTGATGGG
GACGGTAACG GCGACGGCTC CGGTGATGGA GAAGGCGAAG GCGAGGGGGA TGGCGAAGGT
GACGGGGACG GCACGGGTGG GGGCGAAGGT GAAGGCGACG ATGGCAAGTG CGACCCCAAG
ACCGACCCGA ACAAGTGCGT AAAGCCCAGC GTCGAGGGCG AAGCCTGCGA TGCCGAGTTG
AAGTGCGAAG GCGACGTCAT CCAGTGCGCC ATCCTGCGCG CCAACAAAAA CCAGATCTGC
CAGTGGAAGT ACGACGATAA GGTCCGCAGC GATATCGCCT CCGAGCTGGC CGGCAAGGAT
TACCAGCTGG AAGAGAAGTC CCTCGCCGTC AGCAGCCTGT TTACCGAAGC CGTCAACAAG
GGCCGTTGGC TGCCGCAGTC CTGCCCTTCC CCGCAGAGCT TTTCCGTCAT GGGTCGCAGC
TACTCGTTTA GCTGGGAACC CGCCTGCCGT TTCGCCCAAG CCATCGGCCC GCTGATTGTG
GCCCTGGCTT CGATCTTCTT TGCAGTCTCC ATCGGACGCG GAATCAAGGG GTCTTGA
 
Protein sequence
MRRTHFYIAQ ASLLMAALFF STLSRAEEYF WLTVGVRGAS PYSSCSYYAN TTTTSNQPYI 
RNLKVTRQTE TSFLCNFTLS SSASTGGSPK QVATTRYGDT CTGTYNSETG ECVPPQPPSE
CQSKAGQHTT WSMLRPDLNG LGSIEYGCEA GCRIELGTSQ CAPVSEGATT GVCWGAGTFT
GAECQPGDNP TGGTPPTDPT DPTDPPPECG PDHSWSGTTC VPDEPKECDP STGEVCPPSD
GDGDGDDDGD GDDNDGDGDG DGNGDGSGDG EGEGEGDGEG DGDGTGGGEG EGDDGKCDPK
TDPNKCVKPS VEGEACDAEL KCEGDVIQCA ILRANKNQIC QWKYDDKVRS DIASELAGKD
YQLEEKSLAV SSLFTEAVNK GRWLPQSCPS PQSFSVMGRS YSFSWEPACR FAQAIGPLIV
ALASIFFAVS IGRGIKGS