| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2110 |
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| Symbol | |
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| ID | 5106589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2338357 |
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| End bp | 2339364 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503355 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001187603 |
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| Protein GI | 146307138 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.717737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00928356 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTATCG AGCAACTGCC TGACGGTCGC TGGAAAGTAG ACGTGGAACC CATCAAGGGC
CGGCGCTTTC GCAAGACCTT CAAGACCAAG GGTGAAGCTC AGCGCTTCGA AGCGACCTGC
AGGGCCAATT GCATTGAGTC ACCCGCCTGG ACGCCCAAGC CGAAAGATCG TCGCCGCCTC
TCCGAGCTCT GCACCCGGTA CCACGAACTG CACGGCCATG CCCTGGCTGA CGGTGCCGCG
ATCCTCCGCA CCCTGCAGAA CCTGGCCAAA GACCTGGGCG ACCCCATCGC GGTCAAGCTC
ACCGGCAACG CCTTCTGTGA AACCAGAAAC GCACTGCTCA AGGCTGGCAT CCAGGGCAAA
ACGCTCAACA ACCGGCTCGG CTATCTGAAA GCCATGTTCA ACGAGCTGCA TCGCCTAGGT
GATATTGACT ATCCCAACCC GCTGGCCAAG GTCCGTCCGC TACGCCTACA AGAACGCCCT
ATTTCGTTTC TCTCAACCTG CCAGATAGCT GAACTGCTCG ATGCCCTGGA TGAACGCACC
ACCAGCCCAG GTATTGGCCT GATCGCCCGT GTCTGCCTGA GTACGGGTGC CCGGTGGGGA
GAAGCCCAGG CGCTGACACC TGAGCGAGTG CGAAACGGCA TGGTGACCTT TGCCAACACC
AAGTCGAAGC GGACCCGGTC GATTCCGATC GATAGCGCAC TGGAGAAAGC TCTGCACGTC
TACTTCAAGC GGCACGGCCT GTTCACCAAT TGCATGCTGA CTTTCAGCCG CGTACTGGAG
AAGACCTCGA TCAAGCTCCC GGCCGGTCAG GCCACGCACG TATTGCGGCA CACCTTCGCC
AGTCACTTCG TCATGCGGGG CGGGAACATC CTGACGCTAC AGAAGATCCT GGGGCATACG
TCGCTGGCAA TGACCATGCG CTATGCGCAC CTGTCGCCGG ACCATCTTCA GGATGCTTTG
ACCTTGAATC CGCTTTTCGA CACTTCTTCG ACACCTGCCG AAAGCTGA
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| Protein sequence | MAIEQLPDGR WKVDVEPIKG RRFRKTFKTK GEAQRFEATC RANCIESPAW TPKPKDRRRL
SELCTRYHEL HGHALADGAA ILRTLQNLAK DLGDPIAVKL TGNAFCETRN ALLKAGIQGK
TLNNRLGYLK AMFNELHRLG DIDYPNPLAK VRPLRLQERP ISFLSTCQIA ELLDALDERT
TSPGIGLIAR VCLSTGARWG EAQALTPERV RNGMVTFANT KSKRTRSIPI DSALEKALHV
YFKRHGLFTN CMLTFSRVLE KTSIKLPAGQ ATHVLRHTFA SHFVMRGGNI LTLQKILGHT
SLAMTMRYAH LSPDHLQDAL TLNPLFDTSS TPAES
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