| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2098 |
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| Symbol | |
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| ID | 5109832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2327456 |
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| End bp | 2328667 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503342 |
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| Product | nitrite transporter |
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| Protein accession | YP_001187591 |
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| Protein GI | 146307126 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.209947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0376264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAA GCTTCTGGAA AGCCGGCCAC GCCCCCACCC TGTTCGCCGC CTTCCTCTAT
TTCGACCTGA GCTTCATGGT CTGGTACCTG CTCGGCCCGC TGGCGGTGCA AATCGCCACC
GACCTCGAAC TCAACGCCCA GCAACGCGGC CTGATGGTAG CCACGCCGAT TCTCGCCGGC
GCCGTGCTGC GCCTGTTGAT GGGGTTCCTG TGCGACCGCT TGTCACCGAA GACCGCTGGC
CTGCTCGGCC AGGTGGTGGT GATCATCGCG CTGTTCTGCG CCTGGCAGAT CGGCATCGGC
AGCTACGAGC AGGCGCTGCT GCTCGGCCTG TTCCTCGGTT TCGCCGGCGC CGCCTTCGCC
GTCGCGCTGC CGCTGGCCTC GCAGTGGTAC CCGCCGCAGC ACCAGGGCAA GGCCATGGGC
ATCGCCGGCG CCGGCAACTC CGGCACCGTG CTCGCCGCGC TGTTCGCCCC AGGCCTGGCG
GCGCTATCCG GCTGGCAGAA CGTGTTCGGC TGGGCGCTGA TCCCGCTGCT GGCGACCCTG
GTGATCTTCG CCCTGGTGGC CAGGAACGCG CCGGAGCGGC CCAAACCCAA AGCCTTCGGC
GACTACCTCA AGGCTCTCGG CGACCGCGAC AGCTGGTGGT TCATGTTCTT CTACAGCGTC
ACCTTTGGCG GCTTCATCGG CCTGGCCAGC GCCCTGCCCG GCTACTTCAG CGACCAGTAC
GGGCTGAACC CGGTGACCGC CGGCTACTAC ACCGCGGCCT GCGTCTGCGC CGGCAGCCTG
CTGCGTCCGC TCGGCGGCGC CCTGGCCGAC CGCATCGGCG GTATTCGCAC GCTGCTGATG
ATGTACACCA TCGCCTCGCT GTGCATCGCT GTGGTGGGCT TCAACCTGCC CAGCTCGACC
GCTGCCCTGG CCCTGTTCGT CGCCGCCATG CTTGGCCTCG GCGCCGGCAA CGGCGCGGTG
TTCCAACTGG TACCGCAGCG CTTTCGCAGG GAAATCGGCG TGATGACCGG GTTGATCGGC
ATGGCCGGCG GCATCGGCGG CTTCTTCCTC GCCGCAGGCC TCGGCACCAT CAAGCAGCAC
ACCGGCGATT ACCAGCTCGG TCTGTGGCTG TTCGCCAGCC TCGGCGTGCT GGCCTGGATC
GGCCTGCACG GGGTCAAGCA GCGCTGGCGC ACCACCTGGG GCAGCGCCGC GGTCACCGCC
GCGCGGGTGT AA
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| Protein sequence | MNTSFWKAGH APTLFAAFLY FDLSFMVWYL LGPLAVQIAT DLELNAQQRG LMVATPILAG
AVLRLLMGFL CDRLSPKTAG LLGQVVVIIA LFCAWQIGIG SYEQALLLGL FLGFAGAAFA
VALPLASQWY PPQHQGKAMG IAGAGNSGTV LAALFAPGLA ALSGWQNVFG WALIPLLATL
VIFALVARNA PERPKPKAFG DYLKALGDRD SWWFMFFYSV TFGGFIGLAS ALPGYFSDQY
GLNPVTAGYY TAACVCAGSL LRPLGGALAD RIGGIRTLLM MYTIASLCIA VVGFNLPSST
AALALFVAAM LGLGAGNGAV FQLVPQRFRR EIGVMTGLIG MAGGIGGFFL AAGLGTIKQH
TGDYQLGLWL FASLGVLAWI GLHGVKQRWR TTWGSAAVTA ARV
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