| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2093 |
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| Symbol | |
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| ID | 5109827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2318986 |
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| End bp | 2319729 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503337 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001187586 |
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| Protein GI | 146307121 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0878943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0902648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAA AAGTCTGGCT GGTAGGCGCC GGCCCCGGTG ATCCCGAGTT GCTGACCCTG
AAGGCGGTCA AGGCGCTGAA CCAGGCCGAG ATCGTGATGA TCGACGATCT GGTCAACCCG
GCCGTGCTAG AGCACTGTCC CAACGCGCGC GTCGTCTCGG TGGGCAAGCG CGGCGGCTGC
CGCTCCACTC CGCAGGCTTT TATCCATCGC CTGATGCTGC GCTATGCGCG CCAGGGCAAG
TGCGTGGTGC GCCTTAAAGG CGGCGATCCC TGCATCTTCG GCCGCGGCAG CGAGGAAGCC
GACTGGCTCG GCGCACACGG CATCGAGGTG GAGCTGGTCA ACGGCATCAC TGCCGGCCTG
GCCGGCGCCA CCAACTGCGG CATCCCTCTG ACGCTACGCG GCGTGGCCCG TGGCGTGACC
CTGGTCACCG CCCATACCCA GGATGACAGC TCGCTGAACT GGCAGGCGCT GGCGCAGAGC
GGTACGACGC TGGTGGTCTA TATGGGCGTG GCCAAGCTGG CCGACATTCA GGCTGGCCTG
CTCGCCGGCG GCATGAGCGG CGAAATGCCG GTGGCCATGA TCGAGAACGC CTCGTTGCCC
GCACAGCGCG AATGCCGCAG CCAACTGGGC GCGATGCAGG AAGATGCAAC AGCCTTCGCC
CTGAAGAGCC CGGCCATCCT GGTGATCGGC GAGGTCGCCC GCGCCAGGGC CCAGCTCGGA
ATGCCCCAAC TCCTGCATGC CTGA
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| Protein sequence | MNAKVWLVGA GPGDPELLTL KAVKALNQAE IVMIDDLVNP AVLEHCPNAR VVSVGKRGGC
RSTPQAFIHR LMLRYARQGK CVVRLKGGDP CIFGRGSEEA DWLGAHGIEV ELVNGITAGL
AGATNCGIPL TLRGVARGVT LVTAHTQDDS SLNWQALAQS GTTLVVYMGV AKLADIQAGL
LAGGMSGEMP VAMIENASLP AQRECRSQLG AMQEDATAFA LKSPAILVIG EVARARAQLG
MPQLLHA
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