| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2091 |
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| Symbol | |
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| ID | 5109825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2317189 |
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| End bp | 2317779 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640503335 |
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| Product | RNA polymerase sigma factor SigX |
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| Protein accession | YP_001187584 |
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| Protein GI | 146307119 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0133508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.223352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAAG CTCAATCCCT GCCCACGCGC TATGACCCCC GCGAGCTCAC CGATGAAGAG
CTGGTGGCGC GCGCCCATGA CGAGCTGTTT CACATCACCC GTGCTTATGA AGAGCTGATG
AGGCGCTACC AACGCACATT ATTCAACGTA TGTGCGCGCT ATCTGGGGAA CGAAAGGGAC
GCCGACGATG TCTGTCAGGA GGTGATGCTG AAGGTGCTAT ATGGCCTGAA GAACTTCGAA
GGCAAGTCCA AGTTCAAGAC CTGGCTGTAC AGCATCACTT ACAACGAGTG CATCACTCAG
TATCGAAAAG AGCGGCGCAA GCGTCGATTG ATCGATGCCT TGAGTCTGGA TCCGCTCGAA
GAAGCTTCCG ACGAAAAGAC ACCCAAAGTC GAGGAGCGAG GCGGTCTGGA TCGCTGGTTG
GTTCATGTCA ATCCGATCGA CCGCGAAATT CTGGTGCTAC GATTTGTCGC AGAACTGGAG
TTCCAGGAGA TTGCCGACAT CATGCACATG GGCTTGAGCG CAACGAAGAT GCGCTACAAG
CGAGCATTGG ATCGGTTGCG GGACAAATTT TCGGAAACTT CCGAAACTTA G
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| Protein sequence | MNKAQSLPTR YDPRELTDEE LVARAHDELF HITRAYEELM RRYQRTLFNV CARYLGNERD
ADDVCQEVML KVLYGLKNFE GKSKFKTWLY SITYNECITQ YRKERRKRRL IDALSLDPLE
EASDEKTPKV EERGGLDRWL VHVNPIDREI LVLRFVAELE FQEIADIMHM GLSATKMRYK
RALDRLRDKF SETSET
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