| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2082 |
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| Symbol | |
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| ID | 5109816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2305603 |
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| End bp | 2308224 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503326 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001187575 |
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| Protein GI | 146307110 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.700898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.185792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA CCGTGAATAG CCAATACCGC AAGCGCCTGC CCGGCACCGT GCTGGATTAC
TTCGATGCCC GTGAGGCGGT CGAGGCGATC CAGGCCGGCG CCTGGAGCAA GCTCCCCTAC
ACCTCGCGCG TGCTCGCCGA GCAGCTGGTG CGCCGCTGCG ATCCGCAGGA TCTAACAGCC
TCGCTGGAGC AGCTGGTCTA CCGCAAGCGC GACCTGGACT TTCCCTGGTA CCCGGCGCGC
GTGGTCTGCC ACGACATCCT CGGCCAGACC GCGCTGGTCG ACCTGGCCGG CCTGCGCGAT
GCCATCGCCG AGCAGGGCGG TGACCCGTCC AAGGTCAACC CGGTGGTGCC GACCCAGCTG
ATCGTCGATC ACTCGCTGGC CGTCGAGGCG CCGGGCTTCG ACCCGGACGC CTTCGAGAAG
AACCGCGCCA TCGAAGATCG CCGCAACGAG GACCGCTTCC ACTTCATCGA CTGGACCAAG
ACCGCGTTCA AGAACGTCGA CGTGATCCCG GCCGGCAACG GCATCATGCA CCAGATCAAC
CTGGAGAAGA TGAGCCCGGT GATCCAGGCG CGCGGCGGCA TTGCCTTCCC CGATACCTGC
GTCGGCACCG ACTCGCACAC ACCGCACGTC GATGCTCTGG GCGTGATCGC CATCGGTGTC
GGCGGCCTGG AGGCCGAGAC CGTGATGCTC GGTCATCCCT CGATGATGCG TCTGCCCGAT
ATCGTCGGCG TCGAGCTGAC CGGCAAGCGC CAGCCGGGCA TCACCGCCAC CGATATCGTC
CTGGCGCTGA CCGAGTTCCT GCGCAAGGAG CGCGTGGTGG GTGCCTGGGT CGAATTCTTC
GGCGAGGGTG CCGACAGCCT GTCCATCGGC GACCGCGCCA CCATCTCCAA CATGTGCCCG
GAATACGGCG CCACCGCCGC GATGTTCTAT ATCGACGGCC AGACCATCGA CTACCTCAAG
CTCACCGGCC GCGAGCCGGA CCAGGTGGCG CTGGTGGAAA ACTACGCCAG GACCACCGGT
CTGTGGGCCG ACGCCCTGCA GGGCGCCGAG TACGAGCGGG TGCTGAGCTT CGATCTGTCC
ACCGTGGTGC GTAACCTGGC CGGGCCGTCC AACCCGCACA GGCGGCTGCC GACCTCGGCG
CTGCACGAGC GCGGCATTGC CGACGAGGCC AAGCTGGCCG CGGGCAGGGC CGAAGAGGCT
CAGGGCCTGA TGCCTGACGG TGCGGTGATC ATCGCTGCCA TCACCAGCTG CACCAACACC
TCCAACCCGC GCAACGTGGT CGCTGCCGGC CTGCTGGCGA AAAAGGCCAA CGAGCTGGGC
CTGGTACGCA AGCCCTGGGT GAAGACGTCG TTCGCACCGG GCTCGAAGGT CGCCAAGCTG
TACCTGGAAG AGGCCGGCCT GCTGCCGGAG CTGGAGAAGC TCGGCTTCGG CATCGTCGCC
TACGCCTGCA CTACCTGCAA CGGCATGTCC GGCGCGCTGG ATCCGGCGAT CCAGAAGGAA
ATCATCGAGC GCGACCTGTA TGCCACTGCC GTGCTCTCGG GCAACCGCAA CTTCGACGGT
CGCATCCACC CGTACGCCAA GCAGGCCTTC CTCGCTTCGC CGCCGCTGGT GGTGGCCTAC
GCCATCGCCG GTACCGTGCG CTTCGATATC GAGCAGGATG TGCTCGGCCA TGATGCGGCT
GGCAATCCCG TGACGCTCAA GGACCTGTGG CCGAGCGACG AGGAAATCGA CGCCATAGTC
GCCTCCAGCG TGAAGCCCGA GCAGTTCAAG CAGATCTACA TCCCGATGTT CGACCTCGGG
ACGGTGAGGG AGGCCGAGAG TCCGCTGTAC GACTGGCGGC CGATGTCCAC CTATATCCGC
CGGCCGCCCT ACTGGGAAGG CGCGCTGGCC GGCGAGCGTA CGCTCAAGGG CATGCGGCCG
CTGGCGATCC TGCCGGACAA CATCACCACC GATCACCTGT CGCCGTCCAA CGCCATCCTG
GCGGACTCGG CTGCCGGTGA GTACCTGGCG AAAATGGGCC TGCCGGAAGA GGACTTCAAC
TCCTACGCCA CCCACCGCGG CGATCACCTG ACTGCCCAGC GCGCCACCTT CGCCAACCCG
CAGCTGGTCA ACGAAATGGC CGTGGTCGAC GGGCAGGTGA AGAAGGGTTC GCTGGCGCGC
GTCGAACCGG AAGGCCAGGT AATGCGCATG TGGGAAGCCA TTGAAACCTA CATGAACCGC
AAGCAGAACC TGATCATCAT TGCCGGTGCC GACTACGGCC AAGGGTCATC GCGGGACTGG
GCGGCCAAGG GCGTGCGTCT GGCGGGTGTG GAAGTGATCG TGGCCGAAGG CTTCGAGCGC
ATCCACCGCA CCAACCTGGT GGGCATGGGC GTGCTGCCGG TGGAGTTCAA GCCGGGTACC
ACCCGCCTGA CCCTGGGCCT GGACGGCACC GAGACCTATG ACGTGGAAGG CGACATTTCG
CCGCGCTGCG ACCTGACCCT GGTGGTCAAT CGCCGCAACG GCGAAGTGGT CAGGGTGCCG
GTGACCTGCC GCCTGGACAC GGCTGCGGAT GTCAGCGTGT ACAAGGCCGG CGGTGTGCTG
CAGCGCTTCG CCAAGGACTT CCTCGAAGGC GCGGTGGCGT GA
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| Protein sequence | MTETVNSQYR KRLPGTVLDY FDAREAVEAI QAGAWSKLPY TSRVLAEQLV RRCDPQDLTA
SLEQLVYRKR DLDFPWYPAR VVCHDILGQT ALVDLAGLRD AIAEQGGDPS KVNPVVPTQL
IVDHSLAVEA PGFDPDAFEK NRAIEDRRNE DRFHFIDWTK TAFKNVDVIP AGNGIMHQIN
LEKMSPVIQA RGGIAFPDTC VGTDSHTPHV DALGVIAIGV GGLEAETVML GHPSMMRLPD
IVGVELTGKR QPGITATDIV LALTEFLRKE RVVGAWVEFF GEGADSLSIG DRATISNMCP
EYGATAAMFY IDGQTIDYLK LTGREPDQVA LVENYARTTG LWADALQGAE YERVLSFDLS
TVVRNLAGPS NPHRRLPTSA LHERGIADEA KLAAGRAEEA QGLMPDGAVI IAAITSCTNT
SNPRNVVAAG LLAKKANELG LVRKPWVKTS FAPGSKVAKL YLEEAGLLPE LEKLGFGIVA
YACTTCNGMS GALDPAIQKE IIERDLYATA VLSGNRNFDG RIHPYAKQAF LASPPLVVAY
AIAGTVRFDI EQDVLGHDAA GNPVTLKDLW PSDEEIDAIV ASSVKPEQFK QIYIPMFDLG
TVREAESPLY DWRPMSTYIR RPPYWEGALA GERTLKGMRP LAILPDNITT DHLSPSNAIL
ADSAAGEYLA KMGLPEEDFN SYATHRGDHL TAQRATFANP QLVNEMAVVD GQVKKGSLAR
VEPEGQVMRM WEAIETYMNR KQNLIIIAGA DYGQGSSRDW AAKGVRLAGV EVIVAEGFER
IHRTNLVGMG VLPVEFKPGT TRLTLGLDGT ETYDVEGDIS PRCDLTLVVN RRNGEVVRVP
VTCRLDTAAD VSVYKAGGVL QRFAKDFLEG AVA
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