| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2077 |
|---|
| Symbol | |
|---|
| ID | 5109811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2300372 |
|---|
| End bp | 2301898 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640503321 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001187570 |
|---|
| Protein GI | 146307105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0719754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0665585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCTC TGAACCTGCA TCTGAAAGTC CTGATCACCC TGCTGGTGGC CTTGGGCGTT
CTGATTACGG CATACCAAAT CTTCATTCTC GGCATTCCGG TGACCGAGGA CGAAACCGAC
GACCTGTGGA ACATCGACGC CAAGGTCGAA TTCCTGGCCA GCCCGCGCGA GCCGGTGAAA
CTGCAGATGT TCGTACCGCC GCTGAACCAG GATTACGTCA GCCTCAACGA AAGCTTCATC
TCCAACAACT ATGGCGTCAG CGTCAACCGC GTCGACGGCA ACCGCCGCGT CACCTGGTCG
GCGCGTCGCG CCAACGGCAA GCAGACCCTC TACTACCGCC TGGTGCTGAC CAAGCGTTAC
AGCGGCGAAC AACCGCCGGC CAAAGGCCCG ATCTTCCGCG ACAGCATCCC GGTCGAAGGC
CCGGAGAAGA TCGCCGCCGA AGCCCTGCTC GCGCCGATTC GCCAGCACTC GGCCGACGTC
GAAACCTTCA TCAGCGAGAC CATCAAGCGC GTCAACAACG CCAACGACGA CAACGTAAAA
CTGCTGCTCG GCGGCGACGC CTCCACCGCC AACAAGGCCA AGGTGGTCGA CCTGCTGCTA
TCCATCGCCC ACGTGCCGAT GGAGCGCGTA CACACCATTC GCCTGCAGGC CGAGGTGGCG
CAGTCGCCGG AGCTGTGGCT GCGCAGCTTC AACGGCCAGA AGTGGCTGTA CTTCAACCCG
GAAACCGGTG AGCAGGGCCT GCCGGCCGAT CGCCTGGTCT GGTGGATCGG CGATGGCGAC
CTAGTCAGCC TCGAAGGCGG CCGTCAGGCT CAGGTCAGCT TCAGCCTGAA CAACAGCGAG
ATGAATGCCA TCCGTCTGGC CAAGCTGACC GACGAGAACA CCGACGCCAG CTTCCTCGAA
TACTCGCTGT ACGGCCTGCC GCTGCAGACC CAGCAGACCT TCATGATCAT GGTGATGATC
CCGATCGGCG TGCTGGTCAT CCTGATCCTG CGCAACCTCG GCGGCCTGCA GACCCTGGGT
ACCTTTACCC CGGTGCTGAT CGCCCTCGCC TTCCGCGAAA CCCAGCTGGG CTTCGGCATC
TTCCTGTTCA CCGTGATCAC TGCGCTCGGC CTGTCGCTGC GCTCCTATCT GGAACACCTG
AAACTGCAGA TGCTGCCGCG CCTGTCGGTG GTGCTGACCT TCGTCGTGGT GCTGATCGCC
GCCATCAGCC TGTTCAGTCA CAAGCTGGGC CTGGAGCGCG GCCTGTCGGT GGCGCTGTTC
CCGATGGTGA TTCTGACCAT GACCATCGAA CGCCTGTCGA TCACCTGGGA AGAGCGCGGC
GGCGGCCATG CCTTCAAGGT CGCCATCGGC ACCTTGGTGG CCGCTACCCT GGCGCACCTG
CTGATGAGCG TGCCGGAGCT GGTGTACTTC GTATTCACCT TCCCGGCGGT CCTGCTGATC
CTGGTGGGCT TCATGCTGGC GATGGGTCGC TACCGCGGCT ACCGCCTGAC CGAACTGTTC
CGTTTCAAAG CCTTCCTCAA GGACTAA
|
|---|
| Protein sequence | MRSLNLHLKV LITLLVALGV LITAYQIFIL GIPVTEDETD DLWNIDAKVE FLASPREPVK
LQMFVPPLNQ DYVSLNESFI SNNYGVSVNR VDGNRRVTWS ARRANGKQTL YYRLVLTKRY
SGEQPPAKGP IFRDSIPVEG PEKIAAEALL APIRQHSADV ETFISETIKR VNNANDDNVK
LLLGGDASTA NKAKVVDLLL SIAHVPMERV HTIRLQAEVA QSPELWLRSF NGQKWLYFNP
ETGEQGLPAD RLVWWIGDGD LVSLEGGRQA QVSFSLNNSE MNAIRLAKLT DENTDASFLE
YSLYGLPLQT QQTFMIMVMI PIGVLVILIL RNLGGLQTLG TFTPVLIALA FRETQLGFGI
FLFTVITALG LSLRSYLEHL KLQMLPRLSV VLTFVVVLIA AISLFSHKLG LERGLSVALF
PMVILTMTIE RLSITWEERG GGHAFKVAIG TLVAATLAHL LMSVPELVYF VFTFPAVLLI
LVGFMLAMGR YRGYRLTELF RFKAFLKD
|
|---|
| |