Gene Pmen_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2069 
Symbol 
ID5109803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2292088 
End bp2292900 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID640503313 
Productenoyl-CoA hydratase 
Protein accessionYP_001187562 
Protein GI146307097 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0197302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0807955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT ATCAAGCCTT CCGCGTCGAG TTGGCGGACA AGATCGCCCA TGTGCAGATC 
AACCGCCCGG ACAAGGTCAA TGCGATGAAT GCCGACTTCT GGCGCGAGAT CATCGAGATC
TTCCGCTGGG TCGATGCCAC CGATGCGGTG CGGGTGGTGG TGCTGTCCGG TGCAGGCAAG
CACTTTTCCT CCGGTATCGA TCTGATGCTG CTGGCCTCGG TTGGTTCCCA GCTGGGCAAG
GATGTCGGTC GCAATGCCGA TGCCCTGCGC CGCAAGATCC TCGAACTGCA GGCTTCCTTC
AATGCCGTCG ACCAGTGCCG CAAGCCGGTT CTGGCCGCGA TCCAGGGCTA CTGCCTGGGT
GGCGCCATCG ACCTGATCAG CGCCTGCGAC ATGCGTTACG CCACGGTCGA TGCACAGTTC
TCCATCAAGG AGATCGACAT GGGCATGGCG GCCGATGTCG GTACTCTGCA GCGCCTGCCG
CGTATCATCG GTGACGGCAT GATGCGCGAG CTGGCCTTCA CCGGGCGCAG CATCGACGGC
GCCGAGGCCG CGCGTATTGG TTTGGTCAAT CGCACCTACG AGAGCCAGGA AGCCCTGCTG
GCCGGGGTCA TGGCAATCGC CGCGGACATT GCCGCCAAGT CGCCGGTGGC GATTCGCGGT
ACCAAGGAAA TGATTCGCTA CATGCGTGAT CACCGGGTCG ACGATGGCCT GGAGTACATC
GCCACCTGGA ACGCTGCCAT GCTGCAGTCG GAAGACCTGC GTCTGGCCAT GACGGCGCAC
ATGACCAAGC AGAAACCGGA GTTCGCCGAC TGA
 
Protein sequence
MSDYQAFRVE LADKIAHVQI NRPDKVNAMN ADFWREIIEI FRWVDATDAV RVVVLSGAGK 
HFSSGIDLML LASVGSQLGK DVGRNADALR RKILELQASF NAVDQCRKPV LAAIQGYCLG
GAIDLISACD MRYATVDAQF SIKEIDMGMA ADVGTLQRLP RIIGDGMMRE LAFTGRSIDG
AEAARIGLVN RTYESQEALL AGVMAIAADI AAKSPVAIRG TKEMIRYMRD HRVDDGLEYI
ATWNAAMLQS EDLRLAMTAH MTKQKPEFAD