Gene Pmen_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2056 
Symbol 
ID5109790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2275044 
End bp2275838 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID640503300 
Productenoyl-[acyl-carrier-protein] reductase [NADH] 
Protein accessionYP_001187549 
Protein GI146307084 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0266095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.279691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTC TAACCGGTAA GCGCGTACTC ATCGTTGGCG TTGCCAGCAA ACTGTCCATC 
GCCTCGGGTA TCGCCGCCGC CATGCACCGC GAAGGTGCCG AGCTGGCTTT CACCTACCAG
AACGAGAAGC TCAAGGGCCG CGTCGAAGAG TTCGCCGCCG GCTGGGGCTC CAGCGCCGAC
CTGTGCTTCC CCTGCGATGT GGCCAGCGAC GACGAAATCG CCGCGGTGTT CGAAGCGCTG
AGCAAGAAGT GGGACGGTCT GGACTGCATC GTCCACTCGG TCGGCTTCGC TCCGGGCGAC
CAGCTCAATG GCGACTTCAC CGAAGTGACC ACCCGTGAAG GCTTCAAGAT CGCCCACGAC
ATCAGCGCCT ACAGCTTCGT CGCCCTGGCC AAGGCCGGTC GCGAGATGAT GAAGGGCCGC
AACGGCAGCC TGCTCACCCT CTCCTACCTG GGCGCCGAGC GCACCATGCC GAACTACAAC
GTGATGGGCA TGGCCAAGGC CAGCCTGGAA GCCGGCGTGC GCTACCTGGC CGGCAGCCTC
GGCCCGGAAG GCACTCGCGT CAACGCCATT TCCGCCGGCC CGATCCGTAC CCTGGCTGCC
AGCGGCATCG CCAGCTTCCG CAAGATGCTG GCCGCCAACG AGAAACAGAC TCCGCTGCGC
CGCAACGTCA CCATCGAGGA AGTCGGCAAC GCCGGTGCCT TCCTCTGCTC CGACCTGGCC
TCGGGCATCA GCGGCGAGAT CATGTACGTC GACGGCGGCT TCAACACCAC CGCCATGGGC
GCCATGGAAG ACTGA
 
Protein sequence
MGFLTGKRVL IVGVASKLSI ASGIAAAMHR EGAELAFTYQ NEKLKGRVEE FAAGWGSSAD 
LCFPCDVASD DEIAAVFEAL SKKWDGLDCI VHSVGFAPGD QLNGDFTEVT TREGFKIAHD
ISAYSFVALA KAGREMMKGR NGSLLTLSYL GAERTMPNYN VMGMAKASLE AGVRYLAGSL
GPEGTRVNAI SAGPIRTLAA SGIASFRKML AANEKQTPLR RNVTIEEVGN AGAFLCSDLA
SGISGEIMYV DGGFNTTAMG AMED