| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2055 |
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| Symbol | |
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| ID | 5109789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2273278 |
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| End bp | 2274825 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503299 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001187548 |
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| Protein GI | 146307083 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0614113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.204663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGA CAAACAAATG GCGAGCCTGC CTGATCTGCG CGCTATGCAG CCTTGTGCTC
GGCTGCGCCC TGCCGCCACT GGATGGCCGC ACCGAGAGTC AGGCCTTCAC CCAGGAAGAA
ACGGCCGATA CAACGCTGGG GCAAGCCCTG GGCAGCGAGC GAGACGCTCA TCCCGGGCTG
TCCGGCATCC TGACGCTGGC GGCTGCCCGA GATGCCTTCG CCGCGCGCAT GCTCATGGTC
GAAGCAGCCG AGCGTAGCAT CGATGTGCAG TACTACATCT GGCGCGACGA CATCACCGGC
ACCCTATTGC TCGATGCCCT GCTCAGAGCG GCCGAACGAG GCGTTCGTGT CCGCCTGTTG
CTGGACGACA ACGGTATCGC CGGGCTCGAT CAGATCCTGA GCACGCTCGA CCACCACCCC
AACATCGAGG TGCGCCTGTT CAATCCCTTC TCCCTGCGCC AGGCCAAGGT GCTGGGTTAT
CTGACCCATT TCCCCCGCGC CAACCGGCGC ATGCACAACA AGTCCTTCAC CGTGGACAAC
CAGGCCACCA TTATCGGCGG GCGCAATATC GGCGACGAAT ACTTCGAGGC CAGCGAAGGC
GTGCTCTTCG CCGACCTCGA CGTTCTGGCC ATCGGCCCGG TGGTGGCCGA CACCTCCGCC
GATTTCGATC GCTACTGGGC CAGCGATTCG AGCTATCCGC TGGAGCTGAT CGTGCCTCGC
AGGCGGAACA CCCCGCTGCG CCTGCATGAT CTCGCGGCCG ACCTGTCCGA CTCACCTGCA
GCCAGCGGTT ACGTGAAGGC CCTGCAGGAA AGCGAGTTCA TCCAACGCTT GCTGGACAAG
CGCCTGAGCT TCGAATGGAG CGAGACCACG CTGGTCAGTG ACGATCCCGC CAAGGGTCTC
GGCACGGCCA GTGACGGCCA GCTGTTGATC AGCCACCTGG GCGAGATGCT CGACATCCCC
GAATCGCGGG TCGACCTCGT CTCCCCCTAC TTCGTCCCCA CGCAAACCGG CGTCGATATC
TTCACCGGCC TGGTTCAACG CGGCGTCGAA GTGCGCATTC TCACCAATGC ACTGGAAGCA
ACGGACGTGA CGCCCGTCCA TGCCGGCTAC GCCAAACGCC GTCGCGCACT GCTGGAAGGC
GGCGTCAAAC TCTATGAAAT GCGTCTGGGA GCGGAGGACG ACGGCCACCG GGAAAGGGCC
GGGCCGTTTG GCAGCTCCGG CTCGAGCTTG CATGCCAAGA CCTTCGCGCT CGATGGCCAG
CGGGTCTTCA TCGGCTCATT CAACTTCGAC CCACGCTCCG CCAGCCTCAA CACGGAGATG
GGCTTCCTCA TCGAAAGCCC GGCACTGGCC GCAGCCATTG GCCAGGCATT CGAAGGCGAT
ATCCCGGCCA ATGCCTATGA GCTGGGCCTG GACGAAAACG GCCGGATCTA CTGGCTGCAG
CGCCAGGATG GCGAGCTGCG CCGATTCGAC AGCGACCCCG GCACAGGCCT GCTCAAGCGC
CTGGGCGTGC GCCTGCTCTC GTGGTTGCCC ATCGAATGGC TGTTATGA
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| Protein sequence | MTPTNKWRAC LICALCSLVL GCALPPLDGR TESQAFTQEE TADTTLGQAL GSERDAHPGL
SGILTLAAAR DAFAARMLMV EAAERSIDVQ YYIWRDDITG TLLLDALLRA AERGVRVRLL
LDDNGIAGLD QILSTLDHHP NIEVRLFNPF SLRQAKVLGY LTHFPRANRR MHNKSFTVDN
QATIIGGRNI GDEYFEASEG VLFADLDVLA IGPVVADTSA DFDRYWASDS SYPLELIVPR
RRNTPLRLHD LAADLSDSPA ASGYVKALQE SEFIQRLLDK RLSFEWSETT LVSDDPAKGL
GTASDGQLLI SHLGEMLDIP ESRVDLVSPY FVPTQTGVDI FTGLVQRGVE VRILTNALEA
TDVTPVHAGY AKRRRALLEG GVKLYEMRLG AEDDGHRERA GPFGSSGSSL HAKTFALDGQ
RVFIGSFNFD PRSASLNTEM GFLIESPALA AAIGQAFEGD IPANAYELGL DENGRIYWLQ
RQDGELRRFD SDPGTGLLKR LGVRLLSWLP IEWLL
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