| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2049 |
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| Symbol | tig |
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| ID | 5106588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2264792 |
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| End bp | 2266102 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640503293 |
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| Product | trigger factor |
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| Protein accession | YP_001187542 |
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| Protein GI | 146307077 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.431317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.217945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAG CACTTCTGCT CTTGAGCGCC GCATGACCGT CGGCGTCCCC
GTCGAGCGCA TCGAGACCGA AGTCAACAAG CGTCTGCAAC AGACTGCCCG TCGTGCCAAG
GTCCCTGGCT TCCGTCCTGG CAAGGTGCCG ATGAGCGTTA TCCGTCAGCG TTACGAAGAC
GCCGCTCGTC AGGAAGCGCT GGGCGACCTG ATCCAGGCTA CCTTCTACGA AGCCGTGGTC
GAGCAGAAGC TGAACCCGGC CGGTGCCCCG GCTGTTGAGC CGAAGTCCTT CGAAAAGGGC
AAGGACCTGG AATACGTCGC CACTTTCGAA GTGTTCCCCG AGTTCGAAGT CACCGGCTTC
GACTCCATCG CCATCGAGCG CCTGCAGGCT GACGTGGCCG ACAGCGACGT CGACAACATG
CTCGACATCC TGCGCAAGCA GAACACCCGT TTCGAGGCTG TCGAGCGTGC TGCCGAGAAC
GGCGATCAGC TGAACATCGA TTTCGTCGGC AAGATCGACG GCGAAGCCTT CGCTGGCGGC
AGCGCCAAGG GTACCCAGCT GGTGCTGGGC TCCGGCCGCA TGATCCCGGG CTTCGAAGAT
GCTCTGGTGG GTGTCAAGGC CGGTGAAGAG CGCGTGATCA ACCCGACCTT CCCCGAGGAC
TATCAGAACC TCGACCTGGC CGGCAAGACC GCCGAGTTCG CCGTTACCGT GAACAGCGTT
TCCGCGCCGC AGCTGCCTGA GCTGAACGAC GAGTTCTTCG CCCTGTTCGG CATCAAGGAA
GGTGGTCTGG AAGGTTTCCG CGCCGAAGTT CGCAAGAACA TGGAGCGCGA ACTGCGCCAG
GCCATCAAGT CCAAGGTGAA GAACCAGGTA ATGGACGGCC TGCTGGCTGC CAACCCGGTC
GAAGTGCCGA AGGCGCTGAT CGGCAACGAA GTGAACCGTC TGCGCGTGCA GGCCGTTCAG
CAGTTCGGCG GCAACATCAA GCCTGACCAG CTGCCGGCCG AGCTGTTCGA AGAGCAGGCC
AAGCGTCGCG TGGTGCTGGG TCTGATCGTC GCCGAGGTGG TCAAGCAGTT CGATCTGAAG
CCTGACGAAG CCCGCGTGCG TGAGCTGATC GAAGAAATGG CTTCGGCTTA TCAGGAGCCC
GAGCAGGTTG TGGCCTGGTA CTACAAGAAC GACCAGCAGA TGAACGAAGT GCGTTCGGTT
GTACTGGAAG AGCAAGTTGT AGATACTGTT CTGCAGAAGG CCAACGTGAC CGATAAAGCG
GTCTCCTACG AAGACGCAGT CAAGCCGGCG GAAGCCCCGA AAGCCGACTG A
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| Protein sequence | MQVSVESTSA LERRMTVGVP VERIETEVNK RLQQTARRAK VPGFRPGKVP MSVIRQRYED
AARQEALGDL IQATFYEAVV EQKLNPAGAP AVEPKSFEKG KDLEYVATFE VFPEFEVTGF
DSIAIERLQA DVADSDVDNM LDILRKQNTR FEAVERAAEN GDQLNIDFVG KIDGEAFAGG
SAKGTQLVLG SGRMIPGFED ALVGVKAGEE RVINPTFPED YQNLDLAGKT AEFAVTVNSV
SAPQLPELND EFFALFGIKE GGLEGFRAEV RKNMERELRQ AIKSKVKNQV MDGLLAANPV
EVPKALIGNE VNRLRVQAVQ QFGGNIKPDQ LPAELFEEQA KRRVVLGLIV AEVVKQFDLK
PDEARVRELI EEMASAYQEP EQVVAWYYKN DQQMNEVRSV VLEEQVVDTV LQKANVTDKA
VSYEDAVKPA EAPKAD
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