Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2045 |
Symbol | |
ID | 5109779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2260271 |
End bp | 2261071 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640503286 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001187538 |
Protein GI | 146307073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0321729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.632864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGC GCAAACGTCT GGCACTGCTG ATCTACTTCC TGTTTCTGCT GGTGCCGATC TACTGGCTGC TGAACATGTC GTTCAAGAGC AACACCGAGA TTCTCGGGGG GCTCAGCCTG TGGCCGCAGA ACTTCACCCT GGACAACTAC CGGGTGATCT TCACCGACCG CAGCTGGTAC GAGGGCTACC TCAATTCGCT GTATTACGTC AGCCTCAACA CCCTGATCTC GCTCAGCGTG GCGCTGCCGG CGGCCTATGC CTTCTCGCGC TACCGTTTTC TCGGCGACAA GCACCTGTTC TTCTGGCTGC TGACCAACCG CATGGCGCCG CCGGCGGTGT TCCTGCTGCC GTTCTTCCAG CTCTATTCGT CCATCGGCCT GTTCGACACC CATATCGCCG TGGCGCTGGC GCACTGCCTG TTCAACGTGC CGCTGGCGGT GTGGATTCTC GAGGGCTTCA TGTCCAGCGT GCCGAAGGAA ATCGACGAGA CGGCCTATAT CGACGGTTAC AGCTTCCCGA AATTCTTCGT GAAGATCTTC ATCCCGCTGA TCCGCTCCGG CATCGGCGTC ACGGCCTTCT TCTGCTTCAT GTTTTCCTGG GTCGAGCTGC TGCTGGCGCG CACCCTGACC TCGGTGGACG CCAAGCCCAT CGCCGCAGTG ATGACCCGTA CCGTGTCCGC ATCGGGCATC GACTGGGGCG TGCTGGCCGC TGCCGGGGTG CTGACCATCA TCCCGGGGAT GCTGGTGATC TGGTTCGTTC GCAACCATGT GGCCAAGGGC TTCGCCCTCG GCCGCGTGTA A
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Protein sequence | MMLRKRLALL IYFLFLLVPI YWLLNMSFKS NTEILGGLSL WPQNFTLDNY RVIFTDRSWY EGYLNSLYYV SLNTLISLSV ALPAAYAFSR YRFLGDKHLF FWLLTNRMAP PAVFLLPFFQ LYSSIGLFDT HIAVALAHCL FNVPLAVWIL EGFMSSVPKE IDETAYIDGY SFPKFFVKIF IPLIRSGIGV TAFFCFMFSW VELLLARTLT SVDAKPIAAV MTRTVSASGI DWGVLAAAGV LTIIPGMLVI WFVRNHVAKG FALGRV
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