Gene Pmen_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2034 
Symbol 
ID5109768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2248666 
End bp2249052 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID640503275 
ProductMerR family transcriptional regulator 
Protein accessionYP_001187527 
Protein GI146307062 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.327556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.554633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGG CAACTACCTA CTCCATCTCC GACCTGGCCC GCGAACTGGA CGTGACGCCG 
CGCGCCATCC GCTTCTACGA GGAGCAAGGC ATGCTCGCCC CCGAGCGCCG CGGCCAGGAG
CGCATCTTCA GCCCCCGCGA TCTGGTCACC CTGAAGCTGA TCCTGCGCGG CAAGCGCATC
GGCTTTTCCC TGGCCGAGTG CAAGGAGCTG ATCGACCTCT ATGACCCCAG CAGCGGCAAC
CGCAAGCAGC TGGAAACCTT CATGGAAAAG ATCGCCGCAC GCCGCGCCCA GCTCGAGCAG
CAGTTGCTGG ACATCCGGCA GATGCAGCTG GAGCTCGATA CCGCCGAGGA GCGCTGCCTG
GCAGCCCTGG CCGAAACCGA CATGTAG
 
Protein sequence
MTMATTYSIS DLARELDVTP RAIRFYEEQG MLAPERRGQE RIFSPRDLVT LKLILRGKRI 
GFSLAECKEL IDLYDPSSGN RKQLETFMEK IAARRAQLEQ QLLDIRQMQL ELDTAEERCL
AALAETDM