| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2033 |
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| Symbol | |
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| ID | 5109767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2247438 |
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| End bp | 2248601 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503274 |
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| Product | isovaleryl-CoA dehydrogenase |
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| Protein accession | YP_001187526 |
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| Protein GI | 146307061 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0666462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.420206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACC CCACCCTCAA CTTCGGCCTC GGCGAAACCA TCGATATGCT GCGCGATGCC
GTCCACCACT TCGCCCAGGC CGAGCTGGCC CCGCGCGCGG CGCAGATCGA CCGCGACAAC
GAGTTCCCCA TGGACATGTG GCGCAAGTTC GGCGACATGG GCCTGCTGGG CATGACCGTG
GAAGAGGAAT ACGGCGGCAC CAACATGGGC TACCTGGCCC ATGTGGTGGC CATGGAAGAG
ATCAGCCGCG CCAGCGCCTC GGTCGGCCTG TCCTACGGCG CCCATTCGAA CCTGTGCGTC
AACCAGATAC GCAAGAACGG CACTCACGAG CAGAAGCTCA AGTACCTGCC CAAACTGTGC
TCCGGCGAGC ACGTCGGCGC CCTGGCCATG AGCGAGCCCA ACGCCGGCTC CGACGTGGTG
TCGATGAAGC TGCGCGCCGA GAAGCGCGGC GACCGTTACG TGCTCAACGG CAACAAGATG
TGGATCACCA ACGGCCCGGA CGCCAACACC TACGTGATCT ACGCCAAGAC CGACATCAAC
GCCGGCTCGC GCGGCATGAC CGCCTTTATC GTCGAGCGCG ACTTCAAGGG CTTCTCCCGC
CATCAGAAGC TGGACAAGCT GGGCATGCGC GGCTCCAACA CCTGCGAGCT GGTGTTCGAA
GACTGCGAGG TGCCGGAAGA AAACATCTTG GGTAGCGAAG GCGGCGGTGT GCGCGTGCTG
ATGAGCGGCC TGGACTACGA GCGCACCGTG CTTTCCGGCG GCCCCACCGG GATCATGAGC
GCCTGCATGG ACGTGGTGCT GCCCTACGTG CACGAGCGCC AGCAGTTCAA GCAGTCGATC
GGCGAATTCC AGCTGGTACA GGGCAAGCTG GCCGACATGT ACGCCGGCAT GAACGCCTCC
AAGTCCTACC TGTACAACGT CGCCAAGGCC TGCGACCGCG GCGAGGAATC GCGCAAGGAC
GCCGCCGCGG TAATCCTCTA TACCGCCGAA ATGGCCACCA AAATGGCCCT GGACACCATC
CAGCTGCTCG GCGGCAACGG CTACACCAAC GAGTACCCGG CCGGCCGCCT GCTGCGCGAC
GCCAAGCTCT ACGAAATCGG CGCCGGCACC AGCGAGATCC GCCGCATGCT GATCGGCCGC
GAGCTGTTCA ACGAGACCAA GTGA
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| Protein sequence | MSYPTLNFGL GETIDMLRDA VHHFAQAELA PRAAQIDRDN EFPMDMWRKF GDMGLLGMTV
EEEYGGTNMG YLAHVVAMEE ISRASASVGL SYGAHSNLCV NQIRKNGTHE QKLKYLPKLC
SGEHVGALAM SEPNAGSDVV SMKLRAEKRG DRYVLNGNKM WITNGPDANT YVIYAKTDIN
AGSRGMTAFI VERDFKGFSR HQKLDKLGMR GSNTCELVFE DCEVPEENIL GSEGGGVRVL
MSGLDYERTV LSGGPTGIMS ACMDVVLPYV HERQQFKQSI GEFQLVQGKL ADMYAGMNAS
KSYLYNVAKA CDRGEESRKD AAAVILYTAE MATKMALDTI QLLGGNGYTN EYPAGRLLRD
AKLYEIGAGT SEIRRMLIGR ELFNETK
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