| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2024 |
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| Symbol | |
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| ID | 5109915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2235287 |
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| End bp | 2237182 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503265 |
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| Product | patatin |
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| Protein accession | YP_001187517 |
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| Protein GI | 146307052 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.103399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC GCCGCCCGCC CGTTTTCGCC CGCGAGTGCG ATCTGGTCAT GAAGGGTGGC
ATCACCAGCG GCATCGTCTA CCCCCTGGCA ATCAGCGAAA TCGCCAAGGC CTTCCGCCTG
CGCAGCATCG GCGGCACCAG CGCCGGCGCC ATCGCGGCTG CCGCGGCGGC GGCGGCTGAG
CTGGGTCGCC AGCGCTACCT TGCTGGCGAG CTGAGCGAAG ACCCGCAGGG CTTCGCCGAG
ATCGAACGCC TGCCCTGCCA GCTGTGCCTG CCGGCCACCG AATGCCGCGG CACCCGGTTG
CTGGCCCTGT TTCGTCCGGC GCCGGCCCTG CGCTCTCTGT TCGACAGCTT CACCGCGGCG
CTGGACGCTC GGCGCAACCC GCTGGGCCTG CCCCGCGCAT TGCTCGCTCA CTACTGGCGG
GCGGCAGGCG TCGGCGCCCT GCTCGGCGGC GGCCCGCTGT GGCCGGTCGC ACTGCACGGC
GGCAATCCGC TGCTATGGCT GTGGCTGCTC GGCTGCGCCG GTATCGGCGC CCTGACGGCC
ATCGGCTGGC GCATGCTGCG TCAGATTTCC CGGGAGATGC CGGCCAACGG TTTCGCCCTG
TGTTCGGGCA TGCCCGGTCC GGACGATCAG GCCCCCGACG AGGTGCTGAC GCCCTGGCTG
ACCGAATACC TGGATCGCCT CTGCGGCCAG CGTCAGGCCT GCGCCTCCAA CGCCGACAGC
ATCGAGCGCG AGCGCCCGCT GACCTTCGGC GAATTGCGTC GGCATGGCAT CGACCTGCAG
ATGATGACCA CCTGCGCGAG CATGGCTCGG CCCTTCCGCC TGCCCTTTCG CAACGACGAA
AAAGTGCGCG AGAACAACCA GTTCCATTTC TCCGAGAGCG AGTTCGGCGC GCTGTTTCCG
CAGCGCGTGG TGAACTGGAT GCGCGCCCGA CAGCGCCCGG CGCAACAGGG CGAGCGCAGC
GACGGCCTGT ATCGTCTGCC ACTGCCGGAC GACCTGCCGG TGGTGGTCGC CGTGCGCATG
AGCCTGAGCT TTCCGCTGCT GCTCAGCGCC ATGCCGCTGC ACGCGGTCGA CTACCGCAGC
GACGACAGGC GCCTGGAGCG CTGCTGGTTC ACCGACGGCG GCATCGCCTC GAACTTTCCC
ATCCATTTCT TCGACCAGGC CCTGCCGACC CGGCCCACCT TCGGCCTCGA CCTGGGCAGC
ACCGAGGACG CCGACGGCCC GCGCGTACAT TTTCCGGCAC GCAACGGCGA TGCGCGCCTG
GCCTACTGGC GACGCTTTCC GCAAACCGGG CTCGGCGCGC TGGGCAGCTT CCTGCGCATC
GTGATGAACG TGGCCAAGGA CTGGAACCAC GAAACCCTGT CGCTGCTGCC CGGCTTTCGC
GACCGTATCG GCCTGATCCA GCTCACCCGC GAGGAAGGCG GCCTGAACCT GACCATGCCG
GCCGAGCGCA TTGCCCGCCT CACCGAGTAC GGCCGCCAGG CCGGCATCGA GTTCGTGCGT
CGCTTCGGCG ATCCGGCCTG CTGGCCGGCC GGCGCAGAGC CCGTCGCCAT GAACTGGGAA
AACCACCAGA GCATTCGCCT GCGCCTGATG CTGGCCAGCG TCGCCGAGCA GCTGGCCAGC
CTGGAGCGCG CGTACAGCAC GCTGGCGCAC ACGCCCGAGG ACTACCGGCG CTTCTTCAGC
GAGCGCTACA GCTATCCGTT CAAGGGCCTC GGCAACCTCG AAGCCGACGC CAACGGCCGC
TATCCGAGCC AGGCCGCGTT GGCCCTGGCG CAACTGGAAG CCCTGCGCGA GCTGTCGCGT
CTGCTCGAGG AGCACGCCCT GGAGCGACCT GGCGTGCATC CGGCCGATGG CGCACCCAAG
CCGACCCCGG AGCTGAAACT GCGTCCGCGC GTCTGA
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| Protein sequence | MNDRRPPVFA RECDLVMKGG ITSGIVYPLA ISEIAKAFRL RSIGGTSAGA IAAAAAAAAE
LGRQRYLAGE LSEDPQGFAE IERLPCQLCL PATECRGTRL LALFRPAPAL RSLFDSFTAA
LDARRNPLGL PRALLAHYWR AAGVGALLGG GPLWPVALHG GNPLLWLWLL GCAGIGALTA
IGWRMLRQIS REMPANGFAL CSGMPGPDDQ APDEVLTPWL TEYLDRLCGQ RQACASNADS
IERERPLTFG ELRRHGIDLQ MMTTCASMAR PFRLPFRNDE KVRENNQFHF SESEFGALFP
QRVVNWMRAR QRPAQQGERS DGLYRLPLPD DLPVVVAVRM SLSFPLLLSA MPLHAVDYRS
DDRRLERCWF TDGGIASNFP IHFFDQALPT RPTFGLDLGS TEDADGPRVH FPARNGDARL
AYWRRFPQTG LGALGSFLRI VMNVAKDWNH ETLSLLPGFR DRIGLIQLTR EEGGLNLTMP
AERIARLTEY GRQAGIEFVR RFGDPACWPA GAEPVAMNWE NHQSIRLRLM LASVAEQLAS
LERAYSTLAH TPEDYRRFFS ERYSYPFKGL GNLEADANGR YPSQAALALA QLEALRELSR
LLEEHALERP GVHPADGAPK PTPELKLRPR V
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