| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2017 |
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| Symbol | |
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| ID | 5109908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2226433 |
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| End bp | 2227359 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503258 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187510 |
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| Protein GI | 146307045 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.304165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0736532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGTT TCGATGCGAT GCAGGCCTTC GCCCGGGTGG TGGAGACCGG CAGCTTCACC
CAGGCCGCCG CCACGTTGCA CATGAGCAAG ACCAGCGTCA CGCAGCTGAT CCAACAGCTG
GAGGCGCGCC TGCGCGTACG CCTGCTCAAC CGCACCACGC GCAAGGTCAA CGTCACGGCC
GATGGCGCGG CGTATTACGA GCGGGTGGTG CGCCTGCTGG CCGACATGGA CGACGCCGAG
ACCAGCCTGT CCAGCGCGGC GCTGGCACCG CGGGGCCGCC TGCGCGTGGA TGTACCCAGC
CCGCTGGCGC GCATGCTGCT GATACCGGCG CTGCCGGCCT TCTATGAGCG TTATCCGGAA
ATCCAGCTGA CCATGGGGGT GAGCGACCGC ATCGTCGACA TCATCGGCGA GAACGTCGAT
TGCGTGGTGC GCGGCGGCGA GATCACCGAC CAGTCGCTGG TGGCGCGGCA TATAGGCGAT
CTGCAGCTCG GCATCTACGC CACGCCGGGC TATCTGCAGC GCGCCGGTAC GCCCGGCCAT
CCCCGGGAGC TGGGCGAGGG CGCGCACAGC ACGGTGGGCT TTCTCTGGTC GCGCACCGGC
AAGGCCCTGC CTTACGCCAT GCAGCGCGGC GAGGAGCGCA TCGAGGCCCA GGGCCGCCCG
CTGCTGACGG TCGATGACGG CAATGCCTAT CTCGCCGCCG GTCTGGCGGG GCTGGGCATG
CTCTGGCTGC CGCACTACAT GGCCAGGCCG CATCTGGCCA GCGGCGAGCT GGTGCGCCTG
TTCGACGACT GGCAGATGAC CCCGATGCCG ATGTACCTGG CCTTCCCGCC GAACCGTCAT
GTCAGCGCCA AGCTGCGGGT GTTCATCGAC TGGGTGGTGG GGCTGATGGC CGAGCATGCA
CCGCTGCAGC CGCGCCCGCC GGCGTGA
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| Protein sequence | MDRFDAMQAF ARVVETGSFT QAAATLHMSK TSVTQLIQQL EARLRVRLLN RTTRKVNVTA
DGAAYYERVV RLLADMDDAE TSLSSAALAP RGRLRVDVPS PLARMLLIPA LPAFYERYPE
IQLTMGVSDR IVDIIGENVD CVVRGGEITD QSLVARHIGD LQLGIYATPG YLQRAGTPGH
PRELGEGAHS TVGFLWSRTG KALPYAMQRG EERIEAQGRP LLTVDDGNAY LAAGLAGLGM
LWLPHYMARP HLASGELVRL FDDWQMTPMP MYLAFPPNRH VSAKLRVFID WVVGLMAEHA
PLQPRPPA
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