| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2007 |
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| Symbol | |
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| ID | 5109898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2218501 |
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| End bp | 2219256 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503248 |
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| Product | ABC transporter related |
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| Protein accession | YP_001187500 |
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| Protein GI | 146307035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.069076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0108344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTCCG TGCGCAATCT CCGCAAGGCC TTCAACGGCA CCGAGGTGCT CAAGGGCATC
GACTTGGACG TCGCCGCCGG CGAAGTCGTG GCCATCATCG GCCCCAGCGG CTCGGGCAAG
ACCACCCTGC TGCGCTGCCT CAACCTGCTG GAGCAGCCCA GCGCCGGGCA GATCACCGTC
GGCGATATCC ATATCGATGC CGACCACTCG CTCAAGAGCC AGCAGAAACT GATCCGCCAG
CTGCGCCAGC AGGCCGGGTT CGTGTTCCAG AACTTCAACC TGTTCCCGCA CCGTACGGTG
CTGGAAAACG TCATCGAAGG CCCGGTGCAC GTGAAGAAGG AGCCGCGCGA ACAGGCGGTG
GCCCACGCCC AGGCGCTGCT GGCCAAGGTC GGCCTGAGCG GCAAGGAAGA CGCCTACCCC
AAACGCCTTT CCGGCGGCCA GCAGCAGCGC GTGGCCATCG CCCGCGCCCT GGCCATGCGC
CCGCAGGTGA TCCTGTTCGA CGAACCCACC TCGGCGCTCG ACCCCGAGCT GGTAGGCGAA
GTGCTGTCGA CCATCCGCGC CCTGGCCGAA GAAAAGCGCA CCATGATCAT CGTCACCCAC
GAAATGGCCT TCGCCCGCGA TGTGGCCGAT CGGGCGATCT TCATCGACCA GGGGCAGATC
GTCGAACAGG GCCCGGCCAG AACCCTGTTC GCCACGCCAC AGCAGGAGCG TACGCGGCAG
TTTCTCAGCA AGTTTCTGCT GGAGCGCTCG GTCTGA
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| Protein sequence | MISVRNLRKA FNGTEVLKGI DLDVAAGEVV AIIGPSGSGK TTLLRCLNLL EQPSAGQITV
GDIHIDADHS LKSQQKLIRQ LRQQAGFVFQ NFNLFPHRTV LENVIEGPVH VKKEPREQAV
AHAQALLAKV GLSGKEDAYP KRLSGGQQQR VAIARALAMR PQVILFDEPT SALDPELVGE
VLSTIRALAE EKRTMIIVTH EMAFARDVAD RAIFIDQGQI VEQGPARTLF ATPQQERTRQ
FLSKFLLERS V
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