| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2001 |
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| Symbol | |
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| ID | 5109892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2212170 |
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| End bp | 2213072 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503242 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187494 |
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| Protein GI | 146307029 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0200858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0149686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGACC TCAATGACTT GTTCTACTTC GCCAAGGTGG TGGAAGCCGG CGGCTTTGCC
GCTGCCGGTC GAGCCCTGGG CATTCCCAAA TCGCGCCTGT CACGACGTGT CGCCGAACTG
GAGCAGCGTC TGGGTGCGCG CCTGCTGCAG CGCAGCACGC GGCAACTGGC GCTGACCGAT
ATCGGCGAAC GCTACCTGCG CCATTGCCAG GCCATGCTGC TGGAGGCCGA ACAGGCCGAG
GAAACCGTGG CCAACCTGAC CAGCGAGCCG CGCGGTCGGG TACGTTTCTC CACCCCACCG
GGCGTGGCCT TGCTGCCCGA TCTGATTAAT GATTTTCTGA CACGCTACCC CAGGGTGCAG
CTGGAAGTCG TGCAGACCAG CCGCCGCATC GACCTGCTCA ACGAGGCCGT GGACGTCGCC
CTGCGCGTGC GCAACGCCGA TGACGAAGAA CCGGGCCTGA TCACTCGCCG CCTGCTACCG
GCGCGCGCTC TGGTGGTGGC GCGCCCGGAT CTGATAGCCG GGCTGCGCCT GGAGCAGCCC
GAAGATCTGC AGCAGTTGCC AGCGCTGGGC GCCATCGGAG CCGACCGGCG CATTCATCTG
CGCTTCCATC ACAACAGGAC GCAGGAGGCT CGTGAAATCG CCTTGGAGGC GCGCCTGGCC
GTCGACGACT TTCCCATGCG CAAGTCGGCG GCTTTGGCCG GGGTGGGCAT TACCCTGCTG
CCCACCACCT ACTGCCATGA GGAATTGGCC GATGGCAGCC TGGTGTCATT GCTGCCGCAC
TGGACGGTGC CCGAGGGCTA TGTCCAGTTG GCCTATACCC ACAGGCGCGG CATGTCGCCA
GCTGTCCGCG CCTGGATCGA GCTGCTTAGC GACGCATTCA GTCGCTGGAG CTTCCCGCTG
TGA
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| Protein sequence | MHDLNDLFYF AKVVEAGGFA AAGRALGIPK SRLSRRVAEL EQRLGARLLQ RSTRQLALTD
IGERYLRHCQ AMLLEAEQAE ETVANLTSEP RGRVRFSTPP GVALLPDLIN DFLTRYPRVQ
LEVVQTSRRI DLLNEAVDVA LRVRNADDEE PGLITRRLLP ARALVVARPD LIAGLRLEQP
EDLQQLPALG AIGADRRIHL RFHHNRTQEA REIALEARLA VDDFPMRKSA ALAGVGITLL
PTTYCHEELA DGSLVSLLPH WTVPEGYVQL AYTHRRGMSP AVRAWIELLS DAFSRWSFPL
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