Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1996 |
Symbol | |
ID | 5109887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2204566 |
End bp | 2205879 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503237 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001187489 |
Protein GI | 146307024 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.540244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.136551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGTCGA TTCAGCGCCG GCTGAGCCTG GGACTGGCCG GTGCGCTGCT GCTGGTCGGA TTGATTCTGG CGCAGGCCAG TCTGTGGGTA TTCGACCGCG GCCTGCGTGC CTATCTGGAG GAAGACCTGC GTGACGAGGC GCAGGGGCTG CTCGCCGCTC TGGTGCGGGG GCCGGCAGGG CTGCAGCTGG ACGAGCGACG TCTGGACCCC TCATTTCAGC GGCAGTTTTC CGGGCACTAT TTCCGCATCG ACTTCTCCGA CCGTAGCTGG CGTTCGCGCT CGCTCTGGGA CCGCGAGCTG CTCAAGCCGG ATACCCAGGG CATGCAGGTG GAGCTGGGCG ATGGCCCGCA AGGTCAGCGT CTGCTGATCT ACCGCGCCGA TTACCGCCGC TATGGCGAGA ACCTGTCGAT CAGCGTGGCC CAGGACTATC AGCCGATCCT GCAGAGCTTT CGCCGCATGC AGTGGTTGGG GCTGGGCATG GGCGGGGCGG CGCTGCTGCT GATTCTTGTC GCCCAGCGCT ACACCGTGCG CCGCGCGCTA CGGCCGCTGG AGCAGGTGCG GCGGCAGATC GCCCAGCTGC AGCAGGGCCG CCGCTCCGAT CTGGATGCCG AGGTGCCCGA GGAACTGGAG CCGCTGGTGG CGCAGATCAA TCACCTTCTG GCTCATACCG AAGACACCCT CAAGCGCTCG CGCAACGCCC TGGGCAACCT TGGCCACGCC CTGAAAACGC CCTTGGCGGT GCTGATCAGC CTGGCCGGAC GCGAGGAGCT GAGGGCACAT CCGCAATTGC GCGCCAGCCT GCGCGAACAA CTGGAGCAGA TCGAGCAGCG TCTCAGCCGC GAGCTGGGTC GTGCGCGTCT GGCCGGCGAG GTGCTGCCCG GCGCGCGTTT CGACTGTGCC CAGGAGCTGC CCGGCCTGTT CGCCACCCTG GCGATGATTC ATGACCGCGG TTTGCATCTG GAATGGCAGG CGCCGGAGGG CCTGATAGTG CCGCGCGACC GCGAGGATCT GCTGGAGCTG CTGGGCAACC TGCTGGACAA CGCCTGCAAG TGGGCCGAGC AGCAGGTGCT GCTCTCGGTG GAGGAGGTCG CCGACGGCTA TCGGCTGCTC GTCGATGACG ATGGCCCCGG CATCGATGCC GAGCGGCGCG AGGCCGTGCT CGGCCGCGGT ACCCGTCTGG ACGAGCAGGT GGCAGGGCAT GGCCTGGGCC TCGGTATCGT GCGCGATATC ATCGAGGCCT GGAACGGCCG TATCGAACTG CTGGACAGCC CCTTGGGCGG GCTGCGAGTG GCGGTCAGCC TGCCACGGCG TTGA
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Protein sequence | MRSIQRRLSL GLAGALLLVG LILAQASLWV FDRGLRAYLE EDLRDEAQGL LAALVRGPAG LQLDERRLDP SFQRQFSGHY FRIDFSDRSW RSRSLWDREL LKPDTQGMQV ELGDGPQGQR LLIYRADYRR YGENLSISVA QDYQPILQSF RRMQWLGLGM GGAALLLILV AQRYTVRRAL RPLEQVRRQI AQLQQGRRSD LDAEVPEELE PLVAQINHLL AHTEDTLKRS RNALGNLGHA LKTPLAVLIS LAGREELRAH PQLRASLREQ LEQIEQRLSR ELGRARLAGE VLPGARFDCA QELPGLFATL AMIHDRGLHL EWQAPEGLIV PRDREDLLEL LGNLLDNACK WAEQQVLLSV EEVADGYRLL VDDDGPGIDA ERREAVLGRG TRLDEQVAGH GLGLGIVRDI IEAWNGRIEL LDSPLGGLRV AVSLPRR
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