Gene Pmen_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1991 
Symbol 
ID5109882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2201164 
End bp2202000 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID640503232 
Producthypothetical protein 
Protein accessionYP_001187484 
Protein GI146307019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.104975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.139049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG CAGTTGCAAT CATTCATGGC ATAGGCAAGC AGCCGGACAG TCGCGACCTC 
GAAGGTCAGC ATCTATTCGC GCAGAGACTG ATTCTGGGCC TTCGGCAAAG ACTGGGCGAC
GATGCCAAAC AGGTGGCGTT CCAGACGCTT TACTGGGCCA GCGTGCTCGA CAAGCGCGAA
GAAGCCTTTC TCACCAGGCT CGCGCATGAG CCGGTCACAT GGCGCTGGTT ACGTCGAGCG
GTCACCCTGT TTCTGGGTGA TGCCGCCGGC TATCGCAAGG TCAGCGAAGC CTACGACACC
ACCTACCAGG AAGTTCATCA GTGCGTGCGC AACGGCCTGA GCGCCCTGCG CGCCCAGGTT
GATCCGCAGA CACCGCTACT GGTCGTGGCC CACTCGCTGG GCGGGCACAT ATTCTCCAAC
TACGCCTGGG ACCAGCAGAA ACTCAACGCC ACGCCAAGCT GCCCTCTTGA CCCCTTCCTG
GCCCTCGAGA CGCTTGCCGG CATCATCACC TTCGGCTGCA ATATTCCCCT GTTCACCTTC
GCCTACGATC CGGTGCAACC CATCCGCTTC CCGGGCCATT GCCTGACCGA GCCGATGCGA
CAGCAGGCTC GCTGGCTGAA CCTGTACGCA CCGGCTGACC CGCTTGGCTA TCCACTTCGT
CCCGTCCCAG GCTATACCGA GCTGGTCCAT GAAGATCGCG CCATGGCGGT AGGTCCCTGG
TATCTGCGCC ACACCCCGCT TAGCCACCTG GCTTATTGGC ACGATCAACG CTTTCATCAC
TACGTGGCGC AGGAGATTCG CCGACTGCTG AGTGCCCAGA CAGCCGAAGA GACCTGA
 
Protein sequence
MKLAVAIIHG IGKQPDSRDL EGQHLFAQRL ILGLRQRLGD DAKQVAFQTL YWASVLDKRE 
EAFLTRLAHE PVTWRWLRRA VTLFLGDAAG YRKVSEAYDT TYQEVHQCVR NGLSALRAQV
DPQTPLLVVA HSLGGHIFSN YAWDQQKLNA TPSCPLDPFL ALETLAGIIT FGCNIPLFTF
AYDPVQPIRF PGHCLTEPMR QQARWLNLYA PADPLGYPLR PVPGYTELVH EDRAMAVGPW
YLRHTPLSHL AYWHDQRFHH YVAQEIRRLL SAQTAEET