| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1990 |
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| Symbol | |
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| ID | 5109881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2200753 |
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| End bp | 2201109 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640503231 |
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| Product | putative 6-pyruvoyl tetrahydropterin synthase |
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| Protein accession | YP_001187483 |
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| Protein GI | 146307018 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0619121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.16495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAATTGT TCAAAGAGTT CATCTTCGAG GCGGCTCACC GCCTGCCACA CGTGCCGGAA
GGCCACAAAT GCGGCCGCCT GCATGGCCAC TCTTTCCGCG TTGCCCTGTA CATCGAAGGT
GAAGTCGATC CCTACACCGG CTGGATTCGC GACTTTTCCG AGATCAAGGC GATTTTCAAA
CCGATCTACG AGCAGCTCGA CCACAACTAC CTGAACGACA TCCCCGGCCT GGAAAATCCC
ACCAGCGAAG TGCTGGCCAA GTGGATCTGG CAACAGGTCA AACCGCTGCT GCCGGAACTG
TCGCGGGTAC GCATCCACGA AACCTGCACC AGCGGCTGCG AATACCGCGG CGATTGA
|
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| Protein sequence | MELFKEFIFE AAHRLPHVPE GHKCGRLHGH SFRVALYIEG EVDPYTGWIR DFSEIKAIFK
PIYEQLDHNY LNDIPGLENP TSEVLAKWIW QQVKPLLPEL SRVRIHETCT SGCEYRGD
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