| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1984 |
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| Symbol | |
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| ID | 5106580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2183139 |
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| End bp | 2183462 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640503220 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001187477 |
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| Protein GI | 146307012 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0142259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.337896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAAA GCTGCCTTTC CTCTGTTTTG TTCGCGCTTC TCACCTCCCT CTCCCTTGCT
GTCTCGGCAG CAGAACCTTC CAAGACTGAG CCTGCCAATG CAGCCTTTGC GCAGGTTGCT
CAGGCGATAA CCGTCCATCT GAATACCGCT GATGCCGAGA CTCTCCAGCG TGAGTTAGCT
GGCATCGGCG CAACCAAGGC TCAGGCAATC GTGGCTTATC GAGAAGCTCA CGGTAACTTC
GCTTCGGTTG ACGAGTTACT CGAGGTCAAA GGTATCGGCG CGGCGACTCT GGAGAAAAAT
CGCGACAAGC TCATGGTCGA TTGA
|
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| Protein sequence | MMKSCLSSVL FALLTSLSLA VSAAEPSKTE PANAAFAQVA QAITVHLNTA DAETLQRELA
GIGATKAQAI VAYREAHGNF ASVDELLEVK GIGAATLEKN RDKLMVD
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