Gene Pmen_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1980 
SymbolpheS 
ID5109871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2178617 
End bp2179633 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID640503215 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_001187473 
Protein GI146307008 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0362622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.097332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC TGGATGCATT GGTCTCCCAA GCGCTCGAGG CCGTGCAACA AAGCGAAGAT 
GTCAACGCCC TGGAACAGCT CCGGGTTCAA TACCTTGGCA AGAAAGGCGA GCTGACCGCC
CTGATGCAGA CTCTGGGCAA GCTGTCGGCC GAAGAGCGGC CGCAAGCCGG TGCCCTGATC
AACACTGCCA AGAACCAGGT GCAAGATGCC CTCAACGCCC GCAAATCCGT GCTTGAGCAG
GCTCTGCTCG CCGAGAAGCT GGCATCCGAG CGTATCGATG TGACCCTGCC AGGCCGTGGC
CAGACCTCCG GTGGTCTGCA TCCGGTGACC CGCACGCTCG AGCGTGTCGA GCAGTTCTTC
ACCCATATCG GTTACAGCGT CGCCGAGGGC CCGGAAGTCG AAGACGACTA CCACAACTTC
GAAGCGCTCA ACATCCCCGG CCACCACCCG GCGCGGGCGA TGCACGATAC CTTCTATTTC
AATGCGAACA TGCTGCTGCG CACCCACACC TCGCCGGTAC AGGTGCGCAC CATGGAATCG
CAGCAGCCGC CGATCCGCAT CGTCTGCCCC GGCCGTGTCT ATCGCTGCGA TTCCGATATC
ACCCACTCGC CGATGTTCCA CCAGGTCGAA GGCCTGTTGG TCGACGAGGG CATCAGCTTC
GCCGACCTCA AGGGCACCAT CGAAGAATTC CTTCGCGTGT TCTTCGAGAA ACCGCTGGGC
GTGCGTTTCC GTCCTTCCTT CTTCCCGTTC ACCGAGCCGT CGGCCGAGGT CGACATGCAG
TGTGTGATGT GCTCGGGCAA GGGCTGCCGC GTCTGCAAGC AGACCGGCTG GCTGGAAGTG
ATGGGCTGCG GCATGGTGCA TCCGAACGTG CTGCGCATGA GCGGCATCGA TCCGGAGAAA
TACTCCGGTT TCGCCTTCGG CATGGGCGTC GAGCGCCTGG CCATGCTGCG ATATGGCGTC
AATGACTTGC GCCTGTTCTT CGATAACGAC CTGCGGTTCC TGGCGCAATT TCGCTAG
 
Protein sequence
MENLDALVSQ ALEAVQQSED VNALEQLRVQ YLGKKGELTA LMQTLGKLSA EERPQAGALI 
NTAKNQVQDA LNARKSVLEQ ALLAEKLASE RIDVTLPGRG QTSGGLHPVT RTLERVEQFF
THIGYSVAEG PEVEDDYHNF EALNIPGHHP ARAMHDTFYF NANMLLRTHT SPVQVRTMES
QQPPIRIVCP GRVYRCDSDI THSPMFHQVE GLLVDEGISF ADLKGTIEEF LRVFFEKPLG
VRFRPSFFPF TEPSAEVDMQ CVMCSGKGCR VCKQTGWLEV MGCGMVHPNV LRMSGIDPEK
YSGFAFGMGV ERLAMLRYGV NDLRLFFDND LRFLAQFR