| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1979 |
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| Symbol | rplT |
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| ID | 5109870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2178164 |
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| End bp | 2178520 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640503214 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001187472 |
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| Protein GI | 146307007 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0347964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0774628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTG TTAAGCGTGG CGTTATCGCT CGTGCTCGTC ACAAAAAAAT CCTGAAGCTC
GCCAAGGGCT ACTACGGTGC ACGTTCGCGC GTGTTCCGCG TTGCCAAGCA AGCGGTAATC
AAGGCTGGCC AATACGCCTA CCGTGACCGC CGTCAGCGCA AGCGTCAGTT CCGCGCACTG
TGGATCGCTC GTATCAACGC TGGTGCTCGC GTCAACGGTC TGTCCTACAG CCGTCTGATC
GCTGGCCTGA AGAAAGCGTC GATCGAAATC GACCGCAAGG TTCTGGCCGA TCTGGCAGTG
AACGAAAAAG CGGCGTTTGC TGCGATTGTC GAGAAAGCTA AGGCCGTTCT GGCTTAA
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| Protein sequence | MARVKRGVIA RARHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQRKRQFRAL
WIARINAGAR VNGLSYSRLI AGLKKASIEI DRKVLADLAV NEKAAFAAIV EKAKAVLA
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