Gene Pmen_1977 details

Gene Information

• Locus tag: Pmen_1977
• Symbol: infC
• ID: 5109868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 2177346
• End bp: 2177879
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640503212
• Product: translation initiation factor IF-3
• Protein accession: YP_001187470
• Protein GI: 146307005
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.269445
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 0.0568676
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGACAGG ACAAGCGGGC CGCCCCCAAG GCGCCGATCA ACGAGAACAT CACTGCACGT 
GAGGTTCGTC TGATTGGCGC GGACGGCCAG CAGATTGGTG TGGTTTCCAT CGATGAAGCG 
TTGAACGCTG CCGAGGAAGC CAAGCTGGAT CTGGTGGAGA TTTCCGCAGA CGCGGTGCCA 
CCGGTTTGCC GCATCATGGA CTACGGCAAG CACCTGTTCG AGAAGAAAAA GCAGGCTGCT 
ATTGCCAAGA AGAACCAGCA CCAGCAGCAG ATCAAAGAGA TCAAGTTTCG TCCAGGGACG 
GAAGAAGGGG ATTACCAGGT AAAACTACGC AACCTGGTAC GTTTCCTTGA AGATGGGGAC 
AAGGCCAAGG TATCGCTTCG ATTCCGCGGC CGTGAGATGG CCCACCAGGA GCTGGGTATG 
GAGCTGCTTA AGCGGGTCGA AGCCGACCTC GCCGAACTCG GCACCGTAGA ACAGCATCCT 
AAGCTGGAAG GACGCCAGCT GATGATGGTC ATCGCTCCCA AGAAGCGTAA ATAA 

 

Protein sequence

MRQDKRAAPK APINENITAR EVRLIGADGQ QIGVVSIDEA LNAAEEAKLD LVEISADAVP 
PVCRIMDYGK HLFEKKKQAA IAKKNQHQQQ IKEIKFRPGT EEGDYQVKLR NLVRFLEDGD 
KAKVSLRFRG REMAHQELGM ELLKRVEADL AELGTVEQHP KLEGRQLMMV IAPKKRK