| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1975 |
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| Symbol | |
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| ID | 5109866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2173597 |
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| End bp | 2174880 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503209 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001187468 |
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| Protein GI | 146307003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.185752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0484481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACA CGGCATATCC ACAATCCTAC TACGCCGCTT CAGCCAACCC AGCCCCGCAA
CGCCCTGCCC TGCAGGGCGA GGTGGAAACC GATGTGTGCA TCGTCGGTGC CGGCTATACC
GGGCTGTCGA CTGCATTGTT CCTGCTGGAA AACGGTTTCA GGGTCAGCAT CGTCGAAGCC
GCCAAGGTCG GCTTCGGCGC CTCGGGCCGC AACGGTGGGC AGATCGTCAA CAGCTACAGC
CGCGACATCG ACGTGATCGA GCGCAGCGTC GGCCCCAAGC AGGCGCAACT GCTCGGGCAG
ATGGCCTTCG AGGGCGGGCG CATCATCCGC GAGCGTATCG CCAAGTACGA CATCCAGTGC
GACCTGAAGG ACGGCGGCGT GTTCGCCGCG CTCACCGGCA AGCAGATGGG CCATCTGGAA
GCGCAAAAGA AGCTGTGGGA GCGCTACGGC CATACCCAGC TGGAGCTGCT GGACAGCAAG
CGCATCCGTG AGGTCGTGGC CACCGACAAC TACGTCGGCG GCATGCTGGA CATGAGCGGC
GGCCATATCC ATCCGCTGAA CCTGGCCTTG GGCGAAGCCG CTGCAGTGGA GTCTTTGGGC
GGCGTGATCT ACGAACAGTC CCCCGCCATC CGCATCGAGC GCGGTGCGAA TCCCGTGGTA
CACACGCCCG AAGGGCGCAT CAAGGCCAAG TTCGTGGTGG TCGCAGGCAA CGCCTATCTG
GGCAACCTGA TGCCCGAGCT GTTGACCAAG TCGATGCCGT GCGGCACTCA GGTGATCACC
ACCGAGCCGC TGTCCGATGA GCTGGCCGCC AGCCTGCTGC CGCAGGATTA CTGCGTCGAG
GACTGCAACT ACCTGCTCGA CTACTATCGC CTGTCCGGCA ACAAGCGCCT GATCTTCGGC
GGCGGCGTGG TCTACGGCGC GCGCGACCCG GCCAATATCG AGGCGATCAT CCGTCCGAAG
ATGCTCAAGA CCTTCCCGCA GCTCAAGGAT GTGAAGATCG ACTTCGCCTG GACCGGCAAC
TTCCTGCTCA CACTGTCGCG CCTGCCGCAG GTCGGCCGTA TCGGCGACAA CATCTACTAC
TCGCAGGGTT GCAGCGGTCA CGGCGTCACC TACACACACC TGGCCGGCAA GGTGCTGGCC
GAAGCGCTGC GCGGTCAGGC CGAGCGTTTC GACGCCTTCG CCGGGCTGCC GCACTACCCC
TTCCCCGGCG GGCGGATGTT CCAGGTGCCG TTCAGCGCCA TCGGCGCCTG GTACTACACG
CTGCGCGACA AGCTGGGCGT TTGA
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| Protein sequence | MAHTAYPQSY YAASANPAPQ RPALQGEVET DVCIVGAGYT GLSTALFLLE NGFRVSIVEA
AKVGFGASGR NGGQIVNSYS RDIDVIERSV GPKQAQLLGQ MAFEGGRIIR ERIAKYDIQC
DLKDGGVFAA LTGKQMGHLE AQKKLWERYG HTQLELLDSK RIREVVATDN YVGGMLDMSG
GHIHPLNLAL GEAAAVESLG GVIYEQSPAI RIERGANPVV HTPEGRIKAK FVVVAGNAYL
GNLMPELLTK SMPCGTQVIT TEPLSDELAA SLLPQDYCVE DCNYLLDYYR LSGNKRLIFG
GGVVYGARDP ANIEAIIRPK MLKTFPQLKD VKIDFAWTGN FLLTLSRLPQ VGRIGDNIYY
SQGCSGHGVT YTHLAGKVLA EALRGQAERF DAFAGLPHYP FPGGRMFQVP FSAIGAWYYT
LRDKLGV
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