Gene Pmen_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1974 
Symbol 
ID5109865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2172590 
End bp2173543 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content68% 
IMG OID640503208 
Producthypothetical protein 
Protein accessionYP_001187467 
Protein GI146307002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.260801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0442943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAT CGCTGATTCG CCTCTGCTGT ATCGCTTCCA TCGTTCTACT CGCAGCCTGC 
GCTCGGTCTC CGGTGTTGTC ACCGGAGGCC GAGCGTCTGC CTGAACGGGT CGAGCTCACC
GACGTTCCCT TTTTCCCCCA GGACGCCTAT CAGTGTGGCC CGGCGGCCTT GGCCACCATG
CTCAACCAGC GCGGTCTGAT GACCACGCCG GGTGTGCTCA AGGACAAGGT CTATCTCCCC
AGCCGTGAAG GCAGTCTGCA GGTGGAGATG GTCGCCGCCG CCCGCAGCCA CGAGATGCTG
GTCTATCCGC TGCAGCCGCG TCTGGAGGCG CTGCTGGCCG AAGTGGCCGC CGGTAACCCG
GTGCTGGTGC TGCAGAACCT GGCATTCGAC TGGTACCCGC AGTGGCATTT CGCGGTGGTG
GTCGGCTACG ACCGTCGCGA GCGCACGCTG ATCCTGCGCT CCGGTACCAC GCGTCGACTG
GTGGACAGCT TCGCCAGCTT CGACAAGACG TGGGCACGGG GTGGCCGTTG GGCGGTGCTG
ACCTTGCCGC CGGAGCGCCT GCCGGCGCAG GCGGACATGC ATGCATGGAT GAAGGCCGCC
AACGACCTCG AGCAAACCGG CAATGCCCAG CCGGCGCGGC GTGCCTATCG CCGGGCCAGC
GAGGCCTGGC CGGAGCAGGC GCTGCCCTGG TTCGCCCTGA GCAACAGTCG CTACGCCGAC
GGTGATCGCA AGGGCGCCGA ACAGGCGCTG CGCGAGAGCC TCAAGCGCGA GGCGGATTTC
GCGGCCGGCT GGTTCAACCT GTCCCAGGTG TTGGGCGAGC AGGGTTGTGC GCGCGAGGCG
CAGCAGGCCC AGGCCTGTGC TCAGCGCCTG GCGCCGGAGG ATTCGCGGTT CTCCGTGCCG
CCGAAAGTCA GCGGTTCTGC CGAGCAGTGT CAGGCCTTGC CGGCCTGTCC GTGA
 
Protein sequence
MHKSLIRLCC IASIVLLAAC ARSPVLSPEA ERLPERVELT DVPFFPQDAY QCGPAALATM 
LNQRGLMTTP GVLKDKVYLP SREGSLQVEM VAAARSHEML VYPLQPRLEA LLAEVAAGNP
VLVLQNLAFD WYPQWHFAVV VGYDRRERTL ILRSGTTRRL VDSFASFDKT WARGGRWAVL
TLPPERLPAQ ADMHAWMKAA NDLEQTGNAQ PARRAYRRAS EAWPEQALPW FALSNSRYAD
GDRKGAEQAL RESLKREADF AAGWFNLSQV LGEQGCAREA QQAQACAQRL APEDSRFSVP
PKVSGSAEQC QALPACP