Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1974 |
Symbol | |
ID | 5109865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2172590 |
End bp | 2173543 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503208 |
Product | hypothetical protein |
Protein accession | YP_001187467 |
Protein GI | 146307002 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.260801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0442943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAAT CGCTGATTCG CCTCTGCTGT ATCGCTTCCA TCGTTCTACT CGCAGCCTGC GCTCGGTCTC CGGTGTTGTC ACCGGAGGCC GAGCGTCTGC CTGAACGGGT CGAGCTCACC GACGTTCCCT TTTTCCCCCA GGACGCCTAT CAGTGTGGCC CGGCGGCCTT GGCCACCATG CTCAACCAGC GCGGTCTGAT GACCACGCCG GGTGTGCTCA AGGACAAGGT CTATCTCCCC AGCCGTGAAG GCAGTCTGCA GGTGGAGATG GTCGCCGCCG CCCGCAGCCA CGAGATGCTG GTCTATCCGC TGCAGCCGCG TCTGGAGGCG CTGCTGGCCG AAGTGGCCGC CGGTAACCCG GTGCTGGTGC TGCAGAACCT GGCATTCGAC TGGTACCCGC AGTGGCATTT CGCGGTGGTG GTCGGCTACG ACCGTCGCGA GCGCACGCTG ATCCTGCGCT CCGGTACCAC GCGTCGACTG GTGGACAGCT TCGCCAGCTT CGACAAGACG TGGGCACGGG GTGGCCGTTG GGCGGTGCTG ACCTTGCCGC CGGAGCGCCT GCCGGCGCAG GCGGACATGC ATGCATGGAT GAAGGCCGCC AACGACCTCG AGCAAACCGG CAATGCCCAG CCGGCGCGGC GTGCCTATCG CCGGGCCAGC GAGGCCTGGC CGGAGCAGGC GCTGCCCTGG TTCGCCCTGA GCAACAGTCG CTACGCCGAC GGTGATCGCA AGGGCGCCGA ACAGGCGCTG CGCGAGAGCC TCAAGCGCGA GGCGGATTTC GCGGCCGGCT GGTTCAACCT GTCCCAGGTG TTGGGCGAGC AGGGTTGTGC GCGCGAGGCG CAGCAGGCCC AGGCCTGTGC TCAGCGCCTG GCGCCGGAGG ATTCGCGGTT CTCCGTGCCG CCGAAAGTCA GCGGTTCTGC CGAGCAGTGT CAGGCCTTGC CGGCCTGTCC GTGA
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Protein sequence | MHKSLIRLCC IASIVLLAAC ARSPVLSPEA ERLPERVELT DVPFFPQDAY QCGPAALATM LNQRGLMTTP GVLKDKVYLP SREGSLQVEM VAAARSHEML VYPLQPRLEA LLAEVAAGNP VLVLQNLAFD WYPQWHFAVV VGYDRRERTL ILRSGTTRRL VDSFASFDKT WARGGRWAVL TLPPERLPAQ ADMHAWMKAA NDLEQTGNAQ PARRAYRRAS EAWPEQALPW FALSNSRYAD GDRKGAEQAL RESLKREADF AAGWFNLSQV LGEQGCAREA QQAQACAQRL APEDSRFSVP PKVSGSAEQC QALPACP
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