Gene Pmen_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1973 
Symbol 
ID5109864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2172198 
End bp2172605 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content59% 
IMG OID640503207 
Producthypothetical protein 
Protein accessionYP_001187466 
Protein GI146307001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.182667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0517042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCA CCATGAACCC CGTTATGCGC CGCCTGGCGG CCATCACCGC ACTGTTCCAC 
CTGCTTCTGG TGGTGCAGAT TCCCGCCGCC AATGCGGCGA TGATCGGCAC CCACGAGGTG
ATCGCCGAGC AGCAGCACCA GGTGGATCAG CAGCAACTGA TGGCCATGCT CGATGACGAG
CAGGTGAAGG AGAAGCTGGT GGCCATGGGC GTCGATCGCG AGCAGGTCGA ATCGCGTATC
GCCAGCCTGA CCCCGGCCGA GCTGGCGCAG TTCAACCAGC AACTGGATCA GGCCCCGGCA
GGTGCCGGTG TGGTCGGGAT CATCGTGCTG TTTCTGGTGA TCTTCATCAT CACTGATATG
CTGTGCGCCA CCAACATCTT CAATTTCGTC AAATGCATAA ATCGCTGA
 
Protein sequence
MTITMNPVMR RLAAITALFH LLLVVQIPAA NAAMIGTHEV IAEQQHQVDQ QQLMAMLDDE 
QVKEKLVAMG VDREQVESRI ASLTPAELAQ FNQQLDQAPA GAGVVGIIVL FLVIFIITDM
LCATNIFNFV KCINR