| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1967 |
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| Symbol | |
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| ID | 5109858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2165042 |
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| End bp | 2165794 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503201 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
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| Protein accession | YP_001187460 |
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| Protein GI | 146306995 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
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| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0099529 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.324624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAAG CTGCCATGAC ACCTGCCGAG TTCGAGCAGG CGCTGCGCGC CAAGGGCGCG
CTGTACCACA TCCATCATCC GTTTCATCGC GCCATGTACG AAGGGCGCGC CACCCGCGAG
CAGATTCAGG GCTGGGTGGC CAACCGCTTC TACTATCAGG TCAATATTCC GCTCAAGGAT
GCGGCGATCC TCGCCAACTG TCCGGATCGC GAAACTCGGC GCGAGTGGAT TCAGCGCATC
CTCGACCATG ACGGTGCACC GGGTGAGGAG GGCGGTATCG AAGCCTGGCT GCGCCTGGCC
GAGTCGGTCG GCCTCGACCG CGAGCAGGTG CTGTCGCAGG AGCTGGTGCT GCCCGGCGTG
CGCTTCGCCG TCGACGCCTA CGTCAACTTC GCCCGCCGCG CCAGCTGGCA GGAAGCGGCC
AGCAGCTCGC TGACCGAGCT GTTCGCGCCG ACCATCCACC AGTCGCGCCT GGACGCCTGG
CCGCAGCACT ACCCGTGGAT CGATGCGGCC GGTTACGACT ACTTCCGCAA TCGTCTGAGC
CAGGCGCGGC GCGACGTCGA GCATGGCCTG CGCATCACCC TGGAGCACTA CCGCACCCGT
GATGCGCAGG AGCACATGCT GAACATCCTG CAGTTCAAGC TGGACGTGCT GTGGAGCATG
CTCGACGCCA TGAGCATGGC CTACGAGCTG GAGCGCCCGC CGTATCACAC GGTGACGGCC
GAGCGTGTCT GGCATAAGGG AATCGACCTG TGA
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| Protein sequence | MSQAAMTPAE FEQALRAKGA LYHIHHPFHR AMYEGRATRE QIQGWVANRF YYQVNIPLKD
AAILANCPDR ETRREWIQRI LDHDGAPGEE GGIEAWLRLA ESVGLDREQV LSQELVLPGV
RFAVDAYVNF ARRASWQEAA SSSLTELFAP TIHQSRLDAW PQHYPWIDAA GYDYFRNRLS
QARRDVEHGL RITLEHYRTR DAQEHMLNIL QFKLDVLWSM LDAMSMAYEL ERPPYHTVTA
ERVWHKGIDL
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