| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1966 |
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| Symbol | |
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| ID | 5109857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2164104 |
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| End bp | 2165018 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503200 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_001187459 |
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| Protein GI | 146306994 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0167068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.26132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCC AGATTCTCGG TTCCGCCGCC GGCGGCGGTT TCCCCCAGTG GAACTGCAAC
TGCCGCAACT GCCGCGGCGT GCGCGCCGGC ACCTTGCGGG CGCAGCCGCG CACCCAGTCG
TCCATCGCCA TCTCCGATGA AGGTGAGCAG TGGATCCTGT GCAACGCCTC GCCTGACATT
CGCGCGCAGA TCGAAGCCTT CCCGGCGCTG CAGCCTGCGC GCAAGCTGCG CGACACGGCG
ATCGCCGGCA TCGTCCTGCT CGACAGCCAG ATCGACCATT GCACGGGCCT GTTGACCCTG
CGCGAAGGCT GTCCGCATCA GGTCTGGTGT ACCGAGATGG TCCATCAGGA CCTGACCACC
GGCTTTCCCC TGTTCAACAT GCTCAGCCAC TGGAACGGCG GCCTGCAGCA CCGGCTGATC
GAGCTGGACG CCAAGCCGTT CAGCATCCCC GCCTGTCCGG GGCTGCGCAT CAACGCCATC
GCCCTGCGCA GCAGTGCGCC GCCCTATTCG CCGCATCGCG GCAATCCGCA TCCGGGCGAC
AACATTGGCC TGTTCATCGA GGACCTGCGC ACGGGTGGGA CCTTGTTCTA CGCCCCCGGC
CTGGGCCAGG TGGACGAGCA ACTGCTGGGC TGGATGCGCC GCGCCGACTG CCTGCTGGTG
GACGGCACGC TGTGGCGCGA CGACGAGATG CGCGTATGCG AGGTGGGCGA CAAGCTCGGT
AGCGAGATGG GCCACCTCTG CCAGAGCGGT CCCGGCGGGA TGATCGAGTT GCTCGACGGT
CTGCCGACCG CACGCAAGAT CCTTATCCAT ATCAACAACA CCAACCCGAT TCTCGACCTG
GATTCGCCCG AGCGTGCCGA GCTGGACGCC CACGGCATCG AGGTCGCGTT CGATGGCATG
AGCATCGTTT TGTAG
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| Protein sequence | MQIQILGSAA GGGFPQWNCN CRNCRGVRAG TLRAQPRTQS SIAISDEGEQ WILCNASPDI
RAQIEAFPAL QPARKLRDTA IAGIVLLDSQ IDHCTGLLTL REGCPHQVWC TEMVHQDLTT
GFPLFNMLSH WNGGLQHRLI ELDAKPFSIP ACPGLRINAI ALRSSAPPYS PHRGNPHPGD
NIGLFIEDLR TGGTLFYAPG LGQVDEQLLG WMRRADCLLV DGTLWRDDEM RVCEVGDKLG
SEMGHLCQSG PGGMIELLDG LPTARKILIH INNTNPILDL DSPERAELDA HGIEVAFDGM
SIVL
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