| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1961 |
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| Symbol | |
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| ID | 5109852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2157765 |
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| End bp | 2158694 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503195 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001187454 |
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| Protein GI | 146306989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.141309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.452196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGGA TGTTATTGCT GAGCTGCCTG CTCGCCAGTT TGGCCCAGGC GCTCGACTAC
CAGCTGCAAC CCCGGCAGCT CGCCGAGGGC GTCTGGCTGG TGGAGGGCAG CACCGACAAC
TTTGCAACCG ACAATGGCGG TAATATCGTC AATGTCGGTT TTATCGAAAC CGCCGACGGC
GTGGTGGTGA TCGACAGCGG CCCGTCGCGC CGCTATGGCG AGGCATTGCG CCAAATCATC
GAGAAGACCA CCGGCAAAAC GGTGGTGCAC GTACTGCTGA CCCACCATCA CCCGGACCAT
GTGCTGGGCA ACCAGGCCTT CGCCGGCGTG CCCATCGCGG CGCTGCCGGA GACCACAAGG
TTGTTGGCCG AGCAGGGCGA TGCCATGGCG GAGAACATGT ACCGTCTGGT GGGCGACTGG
ATGCGTGGCA CCGAAGTGGT GTTGCCCAGC GAGGAGGTGC AGGAAGGCAC GCTGGAAATC
GGCGGCCGGC GTCTGCAGCT GCTGGCGCTG CGCGGCCACA CCGGCGCCGA CCTGGCGATT
CTCGACCAGC GCACGGGTGT CTTGTTCGCT GGCGATATCC TGTTCTACCA GCGCGCGCTG
ACCACACCGA ACAGCCCCGG GCTGGATGTG TGGCAGGCCG ATCTGGATCG GCTCGAAGCC
TTGCCGTGGC AGCAGATCGT GCCCGGCCAT GGCCCGGTGA CCACCGACGC GGCGCCTTTC
ACGCAGATGC GCGATTACCT GGGCTGGCTC GACGGCCTGC TACGTCAGGG AGCGGAGCAG
GGCGCGGAGA TGAACGAGCT GATCCGCGCG CCGATCCCCG AGCGTTTCGC CCAGGTGAGT
CTGTCGCGCT ATGAGCTGAT CCGTAGCGTC AGCCACCTCT ACCCGCGCTA CGAGCGCAGC
GCCATGGGGC GGGTGGATCG CCAGGATTAG
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| Protein sequence | MRWMLLLSCL LASLAQALDY QLQPRQLAEG VWLVEGSTDN FATDNGGNIV NVGFIETADG
VVVIDSGPSR RYGEALRQII EKTTGKTVVH VLLTHHHPDH VLGNQAFAGV PIAALPETTR
LLAEQGDAMA ENMYRLVGDW MRGTEVVLPS EEVQEGTLEI GGRRLQLLAL RGHTGADLAI
LDQRTGVLFA GDILFYQRAL TTPNSPGLDV WQADLDRLEA LPWQQIVPGH GPVTTDAAPF
TQMRDYLGWL DGLLRQGAEQ GAEMNELIRA PIPERFAQVS LSRYELIRSV SHLYPRYERS
AMGRVDRQD
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