| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1956 |
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| Symbol | |
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| ID | 5109847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2152583 |
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| End bp | 2153242 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503190 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_001187449 |
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| Protein GI | 146306984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.342311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.646224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACC TGCCCCTGCT TATCCCTGTC CTGCTGCTGG TAATCGGTAG TCACGCCATC
GGCGCCGAGA CCGAGAACGA CGGCGTGCCG CAGATCAACG GCTGCCGAAT CGAACCCGAC
AGCAAATGCC CCAACGCCAA TCTGCGTGGT GCCGACCTGC GCAACCTCGA CATGCGCCGC
ATGGACCTGT CCGGCGCTGA CCTGTCCGGT GCCGATCTAC GCCACGTCAA TCTCGACCTG
GCCAACCTGG AGAAAGCCAA GCTGCGCGGC GCCAACCTCA CCCGCGCCAG CCTGCAACAG
AGCAACCTGC GCCTGGCCGA CCTGTCCGGC GCCAGCCTGG TGGCCATCGG CGGCTGGGCC
CTGTTCGCCC AGGCTGCGCA ATTCGAAGGC GCCGACATGC GCGCCGCCAA CCTGGAATTC
GCCCGCCTCT CCGGGGCCAA GCTGCACAAC GTCCAGCTGC AGGCCGCCAA CCTGGAGATG
ACCTGGCTGA GCAAGGCCGA CCTCAAGGGC GCCCATCTGG AGGATGCCAA CCTGCAGGAA
GTGAAGCTCG GCGGCTCCAA CCTGGAAAAC GCCAACCTCA CCGGCGCGCG CACCCGCTTC
GGCAACTTCC AGGACGCCAA CATGCCCGGC TGCGTGCAAT GCCCCAAGGG CTGGGACTGA
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| Protein sequence | MNYLPLLIPV LLLVIGSHAI GAETENDGVP QINGCRIEPD SKCPNANLRG ADLRNLDMRR
MDLSGADLSG ADLRHVNLDL ANLEKAKLRG ANLTRASLQQ SNLRLADLSG ASLVAIGGWA
LFAQAAQFEG ADMRAANLEF ARLSGAKLHN VQLQAANLEM TWLSKADLKG AHLEDANLQE
VKLGGSNLEN ANLTGARTRF GNFQDANMPG CVQCPKGWD
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