| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1935 |
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| Symbol | |
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| ID | 5110063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2128886 |
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| End bp | 2130307 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640503170 |
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| Product | DNA repair nucleotidyltransferase/DNA polymerase-like protein |
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| Protein accession | YP_001187429 |
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| Protein GI | 146306964 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.450324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.612311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC TCTGGGCCTG CATCCTGCTG CCGCAGCTGG CGCTCGATGG CGTCATGCGC
CAGCGCGTCG AGCAGACCGA GCCGCTGGTG CTGCTCGGCG GCCCGCCACA GCGGCGCGTG
CTGCAGGCGG TCAACCCGGC GGCGCGGGCG CTGGGCCTCA AGCCCGGGCA GCTGCTCAGC
GCAGCGCAGG CGCTGACCCG CGGCTTCGCC AGCGCCGACT ATGACCTTGC CGCCATCGAA
CGCTGGCAGC AGTTTCTCGC TGCCTGGGCC TATGGTTTCA GCGCCCAGGT CAGCCTGCAC
TACCCGCGCT GCCTGTTGCT GGAAGTGGGT TCCAGCCTCG GCCTGTTCGG CCCCTGGCCG
CACTTCGAGG CGCGCCTGCG CCGGGAGCTG GGCGAGCTGG GTTTCCAGCA GCGCATCACC
CTGGCACCCA ATCCGGTCGC CGCGCGCATG CTGGCCAACG TCCACGACGG CCTGGCGATC
GGCGACGCGG CCGAGCTGCG CGCCGCGCTC GAGCGCCTGC CAGTCGACCG TATCGGCCTG
TCCCGCGAGA CCGCCTCCGC CCTCACCCGC ATGGGCCTGC GCAGCCTGCA GCAGTTACTC
GCGCTGCCGC GTGACGGCCT GGCGCGGCGC TTTCCGGCCG AGCTGCTGCG CCACCTCGAC
AGCCTGCTCG GCGAACGGGC GCTGGCCCTG GATTTCTACC GCCCGCCGGA TCGCTTCGAT
ACGCGCATCG AGCTCAACTT CGAGGTCGAG TCGCACCAGG CGCTGCTGTT TCCGCTGCGC
CGTCTGACCG CCGATCTGGC CGCCTACCTG GCCGGACGTG ACAGCGGCGT GCAGCGCTTC
ACCCTGCATC TAGAGCACCG CAATCCCCCG GCCAGCCAGC TGGTGGTGGG CCTGCTCAGC
GCCGAGCGCG ATCCGGCCAT GCTGCTGGAG CTGACCCGCG GCCGCCTGGA GCAGCTGCAA
CTGCCGGCGC CGGTGCTGGC GCTGCGTCTG GAGGCCCGCG AGCTGCCGGC CTTCGCCCCG
CAGCACCGCC AGCTGTTCGA CGAGCGACCG CAGCAGTCGC TGCCCTGGGA GCAACTGCGC
GAACGCCTGC GTGCGCGCCT CGGCGACGAG GCGGTACAGG GCCTTGGCGT CCGCGCCGAT
CATCGCCCGG AGCAAAGCTG GCAGGCCGAG AGCGACCGGC GCACGCCGCC GCTGCCCAGC
GTCGGGCCGC GTCCAGGCTG GCTGCTGGGC GAACCTCAGC CGCTGGCCGA GGCCGGCCTG
CTGATCCTCG CCGGGCCAGA GCGCATCGAA TCGGGCTGGT GGGACGGCGG CGACCTGCGC
CGCGACTATT ACCTGGTGCA AACCCGCAGC GGCCAGCGCG CCTGGGCCTT TCGCCCGGTC
GGCGGCGCAG GGCCGCTGCA GCTGCATGGC TGGTTCGCAT GA
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| Protein sequence | MNPLWACILL PQLALDGVMR QRVEQTEPLV LLGGPPQRRV LQAVNPAARA LGLKPGQLLS
AAQALTRGFA SADYDLAAIE RWQQFLAAWA YGFSAQVSLH YPRCLLLEVG SSLGLFGPWP
HFEARLRREL GELGFQQRIT LAPNPVAARM LANVHDGLAI GDAAELRAAL ERLPVDRIGL
SRETASALTR MGLRSLQQLL ALPRDGLARR FPAELLRHLD SLLGERALAL DFYRPPDRFD
TRIELNFEVE SHQALLFPLR RLTADLAAYL AGRDSGVQRF TLHLEHRNPP ASQLVVGLLS
AERDPAMLLE LTRGRLEQLQ LPAPVLALRL EARELPAFAP QHRQLFDERP QQSLPWEQLR
ERLRARLGDE AVQGLGVRAD HRPEQSWQAE SDRRTPPLPS VGPRPGWLLG EPQPLAEAGL
LILAGPERIE SGWWDGGDLR RDYYLVQTRS GQRAWAFRPV GGAGPLQLHG WFA
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