| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1934 |
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| Symbol | dnaE2 |
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| ID | 5110062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2125809 |
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| End bp | 2128889 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503169 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_001187428 |
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| Protein GI | 146306963 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0139985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.548087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCG ACTATGCCGA GCTGCACTGC CTGTCCAATT TCAGCTTTCA ACGTGGAGCC
TCCAGCGCCC GCGAGCTGTT CGAGCGCGCC GCGCGCCTCG GCTACCGAGC CCTGGCAATC
ACCGACGAAT GCACGCTCGC CGGCATCGTG CGCGCCTGGC AGGCGGCCAG GGAGACCGGC
CTGGCGCTGA TCGTCGGCAG CGAGATGCCC ATCGAGGGCG GCCCCAAGCT GGTGCTGCTG
GCCGAGGATC TGGCCGGTTA CCAGGCGCTG TGCCGGCTGA TCACCGTCGC CCGGCGCCGC
GCCGAGAAGG GTCGCTACCG CCTGCTGCGC GAGGACTTCG ACACGCCGCT GGCCGGCCTG
CTGGCGATCT GGCTGGCCGA ACCGCAGGCC AGCGACAGCG AGGGCGCCTG GTTGCGCCAG
CGTTTTGCCG ACCGCCTGTG GCTGGGCATC GAACTGCACC GCGGCGCCGA CGATGCCGCC
CGCCTGCGCC AGTTGCAGGC CCTGGCCGCG CGCCTGCAGA TTCCCGCCCT GGCCTGCGGC
GACGTGCATA TGCACGCCCG CGGCCGCCGC GCCCTGCAGG ACTGCATGAC CGCCATCCGC
CAGCACCTGC CGGTGGCCGA GGCCGGCGCC TGGCTGTTCC CCAACGGCGA GCGTCACCTG
CGCCGGCGCG AGGAGCTGGC CGAGCTGTAT CCGCAGGAAT TGCTCGACGA GACGCTACGG
GTGGCCGCGC GCTGCCACTT CGAGCTCGAC CAGCTGAAAT ATCAATACCC GCACGAGCTG
GTGCCGGCCG GCCACGACGC CTCCTCATGG CTGCGTCATC GGGTCGAAGA AGGCCTGCGC
TGGCGCTGGC CGGATGGCGC CAGCACCAAG GTGCGGACGC AGGTCGAGCA CGAGCTGCAG
CTGATCACTG AGCTGAAATA CGAGAGCTAC TTTCTCACCG TGCACGACAT CGTCAGCTGG
GCCCGCAAGC AGCACATCCT CTGCCAGGGC CGCGGCTCGG CGGCCAACTC GACCGTGTGC
TTCGCCCTCG GCATCACCGA ACTGAATCCG GACAACTCGG GCAGCCGGCT GCTGTTCGAA
CGCTTTCTCT CGCGCGAGCG CAACGAGCCG CCGGATATCG ACGTCGACTT CGAGCACGAA
CGCCGCGAGG AAGTCATCCA GTACGTGTTT CGCCGCTATG GCCGCCAGCG GGCGGCGCTC
ACCGCGGTGG CCAGCACCTA CCACGGCGCC GGCGCGCTGC GCGACGTGGC CAAGGCGCTC
GGCCTGCCGC CCGATCAGGT TGGCGCCCTG GCCGACTGCT GTGGACGCTG GAGCGACCAC
ATGCCGGACG CCGAGCGCCT GCGCGAGGCC GGCTTCGACC CGGACAGCCC TTCGCTGCAC
CGCATCCTGA CCCTGGCCGG CGAGCTGATC GGCTTTCCCC GCCACCTGTC GCAGCACCCG
GGCGGCTTCG TCATCTCCGA ACACCCGCTG CAGACCCTGG TGCCGGTGGA GAACGCCAGC
ATGGCCGAGC GCACCGTGAT CCAGTGGGAC AAGGACGACC TCGACCTGGT CGGCCTGCTC
AAGGTCGATA TCCTCGCCCT CGGCATGCTC AGCGCGCTGC GCCGCTGCTT CGCCCTGATC
GAGCGCTACC GCGGCACGCG CTGGACCCTG GCCAGCCTGC CGCAGGAGGA TGCGGCGACC
TACGCCATGA TCAGCCGCGC CGACACCGTC GGCGTGTTCC AGATCGAGTC GCGCGCGCAG
ATGGCCATGC TGCCGCGCCT GCGCCCAAAG ACCTTCTACG ACCTGGTGAT CCAGGTGGCC
ATCGTCCGCC CCGGGCCGAT CCAGGGCGAC ATGGTTCATC CCTATCTGCG CCGGCGCAAC
GACGAGGAGC CGGTGGAATA TCCTTCAGAC GAATTACGAC CGGTGTTCGC ACGCACCCTC
GGCGTGCCGC TGTTTCAGGA GCAGGTGATG GAGCTGGCCA TGGTCGCCGC CGATTACAGC
CCCGGCGAGG CCGACGAGCT GCGCCGCTCG ATGGCCGCCT GGAAGCGCCA CGGCGGGCTG
GAGCCGCATC GCCAGCGGCT CACCTCACGC ATGCTGGAAA AAGGCTACAC GGCGGAATTC
ACCGCGCGCA TCTTCCGCCA GATCGAGGGT TTCGGCAGCT ACGGCTTCCC CGAATCCCAC
GCCGCCAGCT TCGCCCTGCT CACCTACGCC AGCTGCTGGC TGAAATGCCA CGAGCCGGCC
GCCTACGCCT GCGCCCTGGT CAACAGCTGG CCGATGGGCT TCTACAGCCC CGACCAGGTG
CTACAGGACG CCCGCCGCCA CGGCATCGAG GTACGCCCGG CAGACGTGCG CCACAGCGCC
TGGGACTGCA GCCTGGAGCC AAGCGACGGC GAGCAGCCGG CAATTCGCCT GGGGCTGCGC
CTGCTGCGCG GCTTTCGCGA GGAGGATGCC CTGCGCATCG AGGCGACGCG GCAGGCGGCG
CCCTTCACCG ATGTGGACGA TCTGTGCCGA CGCGCCACAC TGGATGCCCG CGCGCGCGAA
TGCCTGGCGG ACGCCGGCGC CCTGCGCGGC CTGGCCGGCA ACCGTTATCG CGCCCGCTGG
GCGGTGGCCG GAGTGGAACC GCAGCTGCCG CTGTTCGCCG GCCATTCCAG CCGTGAAGAA
CCCGTGGCGC TGCCACGGCC CACGGTCGGC GAAGACCTGC TGACGGATTA CGCCACCTTC
GGCACCACCC TCGGCCCGCA CCCGCTGGCG CTGCTGCGCG AACGACTGAG GGCCAAACGC
TGCCGCAGCT CGCACGAACT GTGCACAGTC GAGCACGGCC GCCCGGTCAG CGTCGCCGGC
CTGGTGATCG GCCGCCAGCG CCCGCAGACC GCGAGCGGAG TGATCTTCGT CACCCTGGAA
GACGAGTTCG GCATGGTCAA CGTGGTGGTC TGGCATGACC TGGCCGAGCG CCAGCGCCGG
GTGCTGCTGC AATCACGCCT GCTGCGCATC GACGGCCACC TGGAAAGCGC CGACGGCGTG
CGCCACGTCA TCGCCGGGCG CCTGACCGAC CTGAGCCCGC TGCTGACCGG GCTCGATGTG
AAGAGCCGGG ATTTTCACTG A
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| Protein sequence | MTPDYAELHC LSNFSFQRGA SSARELFERA ARLGYRALAI TDECTLAGIV RAWQAARETG
LALIVGSEMP IEGGPKLVLL AEDLAGYQAL CRLITVARRR AEKGRYRLLR EDFDTPLAGL
LAIWLAEPQA SDSEGAWLRQ RFADRLWLGI ELHRGADDAA RLRQLQALAA RLQIPALACG
DVHMHARGRR ALQDCMTAIR QHLPVAEAGA WLFPNGERHL RRREELAELY PQELLDETLR
VAARCHFELD QLKYQYPHEL VPAGHDASSW LRHRVEEGLR WRWPDGASTK VRTQVEHELQ
LITELKYESY FLTVHDIVSW ARKQHILCQG RGSAANSTVC FALGITELNP DNSGSRLLFE
RFLSRERNEP PDIDVDFEHE RREEVIQYVF RRYGRQRAAL TAVASTYHGA GALRDVAKAL
GLPPDQVGAL ADCCGRWSDH MPDAERLREA GFDPDSPSLH RILTLAGELI GFPRHLSQHP
GGFVISEHPL QTLVPVENAS MAERTVIQWD KDDLDLVGLL KVDILALGML SALRRCFALI
ERYRGTRWTL ASLPQEDAAT YAMISRADTV GVFQIESRAQ MAMLPRLRPK TFYDLVIQVA
IVRPGPIQGD MVHPYLRRRN DEEPVEYPSD ELRPVFARTL GVPLFQEQVM ELAMVAADYS
PGEADELRRS MAAWKRHGGL EPHRQRLTSR MLEKGYTAEF TARIFRQIEG FGSYGFPESH
AASFALLTYA SCWLKCHEPA AYACALVNSW PMGFYSPDQV LQDARRHGIE VRPADVRHSA
WDCSLEPSDG EQPAIRLGLR LLRGFREEDA LRIEATRQAA PFTDVDDLCR RATLDARARE
CLADAGALRG LAGNRYRARW AVAGVEPQLP LFAGHSSREE PVALPRPTVG EDLLTDYATF
GTTLGPHPLA LLRERLRAKR CRSSHELCTV EHGRPVSVAG LVIGRQRPQT ASGVIFVTLE
DEFGMVNVVV WHDLAERQRR VLLQSRLLRI DGHLESADGV RHVIAGRLTD LSPLLTGLDV
KSRDFH
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