| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1921 |
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| Symbol | |
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| ID | 5110049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2113369 |
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| End bp | 2114391 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503156 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001187415 |
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| Protein GI | 146306950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00271277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.413551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC TGTTGCGTGC GCTTCCTTGG CTGTGGCTGG GCTTGTGGGC ACTGCCTGCA
GCGGCGGCCG AAGGGCCGAT GGTCGAGGTC GTGCCGGTAC GGCAGATGGA GGTGCGTGAC
GAGCTGATCA CCTTCGGTTC GCTGCGCTCC GACGAGTCGG TGATGATTCG TCCGGAAGTG
GAAGGGCGCC TGGCCACCCT GCATTTTCGC GAGGGGCAGG CGGTGACCGC CGGCGATCTG
CTGGTCAGCC TCGACGATGC CATTACCCGG GCCGAGTTCG CCCAGGCCAG GGCCAATCTC
GATCTCGCCG AGAAGAACCA TCAACGCGCG CAGATGCTGT TCCAGCGCGG CGCCAGCAAT
GCCCAGGCGC TGGACGAGGC GCAGAGCCAG CTGCAGGCGT CGCGCGCCAG CCTGGCTCTG
GCCCAGGCGC GGCTCGACAA GACCCAGATC AAGGCGCCCC ACGACGGCGT GCTCGGCCTG
CGCCAGGCCA GCGTCGGCGA CTACCTCAGC GCCGGACAGA ACATCGTCAA TCTGGAAGTG
CTCGACCCGC TCAAGGTGGA CTTTCGCATT CCACAGAAGG CCGTGGCCCA GGTGCGCCTC
GGCCAGACCG TGGAAGTCAC CCTCGACACC TACCCCGGCG AGCGTTTTCG TGGCGAGATC
TATGCGCTCA ACCCGCGCCT GGATGAGGCC GGGCGCAGCC AGGCCATCCG CGCCCATATC
GGCAACGACG ATCGCCGCCT GCGTCCGGGG CAGTTCGTGC GCGTGTCGGT GATCCTCGAG
GAGCGGCCGC AGGCGCTGGT GATCCCCGAG GAGGCGGTGA TGCCGCAGGG CGACAAGCTG
CTGGTCAATC TGCTGGTGGA CGGCAAGGTC GAGCGCCGCG AGGTGATCCT GGGCAAGCGT
TTCGATGGCC TGGTAGAGGT GCGCGAGGGC TTGCAGGGTG ACGAGACGGT GATCAGCGCC
GGCTGGCAGC GCGTACGTGA AGGGCTGGCG GTGCGCAGCA AGAGCGGGGA GCGCCAGCGG
TGA
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| Protein sequence | MTVLLRALPW LWLGLWALPA AAAEGPMVEV VPVRQMEVRD ELITFGSLRS DESVMIRPEV
EGRLATLHFR EGQAVTAGDL LVSLDDAITR AEFAQARANL DLAEKNHQRA QMLFQRGASN
AQALDEAQSQ LQASRASLAL AQARLDKTQI KAPHDGVLGL RQASVGDYLS AGQNIVNLEV
LDPLKVDFRI PQKAVAQVRL GQTVEVTLDT YPGERFRGEI YALNPRLDEA GRSQAIRAHI
GNDDRRLRPG QFVRVSVILE ERPQALVIPE EAVMPQGDKL LVNLLVDGKV ERREVILGKR
FDGLVEVREG LQGDETVISA GWQRVREGLA VRSKSGERQR
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