| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1918 |
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| Symbol | |
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| ID | 5110046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2110737 |
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| End bp | 2111399 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503153 |
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| Product | transglutaminase-like enzymes putative cysteine protease-like protein |
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| Protein accession | YP_001187412 |
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| Protein GI | 146306947 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00195595 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.575726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATGCCT ATCTGCGACC CGGCCGCTTC ATTGACAGTG ACCACCCTGC GGTAGTCGAG
TTCGCCGAAC GTTGCCGTGG TGCTGCACGC GAGCCGCGCA GCCAGGCCAT CGCCCTGTAC
CTGGCGGTGC GTGACGGCGT GCGCTACAAC CCCTATTCCT TCAGCCTCGA TGCGCAGACG
CTCAAGGCCA GTCATGCCCT GGAAGCCGGG GAGTCCTACT GCGTGCCGAA GGCCAACCTG
CTCGCTGCTT GCGCCCGGCA CTGCGGCATC CCCGCGCGTA TCGGCCTGGC CGATGTGCGC
AATCACCTGT CCACGCCACG TCTGCTGGAG TTGCTACGCA GCGAAGTGTT CGCCATGCAT
GGCTACACCG AGCTGTATCT GGACGGTCGC TGGGTCAAGG CCACGCCGGC GTTCAACGAG
GCGTTGTGCC GGGTGTTCAA GGTGGCGCCG CTGGAGTTCG ACGGCCTGCA TGACAGCGTC
TTTCACCCCT ACAACGACAA GGGCGAGCGC TACATGGAAT ACCTGATCGA TCATGGCCAG
TTCGAGGATC TCCCCGAGGA ACTGTTCTTC GACCACCTGC AGCGCTGCTA TCCGCATCTG
TTCGAGGCCG GCACGCAGGG GCTGCAGGGC GACATGCAGC GTGAGGCGGC AGCTATCGAC
TGA
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| Protein sequence | MHAYLRPGRF IDSDHPAVVE FAERCRGAAR EPRSQAIALY LAVRDGVRYN PYSFSLDAQT
LKASHALEAG ESYCVPKANL LAACARHCGI PARIGLADVR NHLSTPRLLE LLRSEVFAMH
GYTELYLDGR WVKATPAFNE ALCRVFKVAP LEFDGLHDSV FHPYNDKGER YMEYLIDHGQ
FEDLPEELFF DHLQRCYPHL FEAGTQGLQG DMQREAAAID
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