Gene Pmen_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1912 
Symbol 
ID5110040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2103957 
End bp2104847 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID640503143 
Producthypothetical protein 
Protein accessionYP_001187406 
Protein GI146306941 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.134898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.72221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTCCC GATTGCAGAG TTTTCTAATC CGCGCCGAGC AGGTGCTGGA GCGTCTCGAG 
CCCTTGTTGC CAGCTCTGCG CCCCGAACTG GACTGGCAGC AGTGCGTGGC GGCCCGCTGG
GTGCGCGACG GGCGCAGCGG CTTTCTGCAG CCGCTGGATG TCAGCCTGGA CCTGTCCTTG
AGCGACCTGC TCGGTGTCGA CGCCCAGCGC GAGCAGCTGG CGCGCAACAC CCGCCAGTTC
GTCAAAGGCC TGCCGGCCAA TCACGCCCTG CTGTGGGGCG CGCGCGGCAC CGGCAAGTCG
TCGCTGGTAC GGGCGCTGCT GGCCGAGCAT GCCGCGGCCG GGCTGCGCCT GATCGAAATC
GAGCGTGATC ATCTGGCCGA CCTGCCGCGC GTGGTGGCCT TGCTGGCCGG GCTGACGCAG
CGCTTCGTGC TGTTCTGCGA CGACCTGTCG TTCGAAGCCG GCGAGGGCGA CTATCGCGTG
CTCAAGACCG TGCTCGACGG TTCGCTGGAG CAGGCACCGG ACAATGTGCT GCTGTATGCC
ACGTCCAATC GTCGTCACCT GGTGCCCGAG CGTCAGAGTG ACAACGAGAA CTGGAAGATG
GTCGACGGCG AGCTGCATCC CAGCGAGGCG GTGGAAGACA AAATCGCGCT GTCGGACCGT
TTCGGTCTGT GGCTGTCGTT CTACCCCTTC AGTCAGGAGC ACTACCTGAT CGTGGTGCGT
CACTGGGTCG GCGTGCAGGC GCGCCAGGTA GGCCTGGACT GGGCCTGGGA CGAGGCGCTG
GAAAAGGCCG CCATTCGCTG GGCGCTGGCT CGGGGCAATC GCAACGGCCG CTGCGCTTAT
CAATTCGCCC GCCACTGGGT CGGGCTGCAA CTGTTGGAGC AACAACCATG A
 
Protein sequence
MDSRLQSFLI RAEQVLERLE PLLPALRPEL DWQQCVAARW VRDGRSGFLQ PLDVSLDLSL 
SDLLGVDAQR EQLARNTRQF VKGLPANHAL LWGARGTGKS SLVRALLAEH AAAGLRLIEI
ERDHLADLPR VVALLAGLTQ RFVLFCDDLS FEAGEGDYRV LKTVLDGSLE QAPDNVLLYA
TSNRRHLVPE RQSDNENWKM VDGELHPSEA VEDKIALSDR FGLWLSFYPF SQEHYLIVVR
HWVGVQARQV GLDWAWDEAL EKAAIRWALA RGNRNGRCAY QFARHWVGLQ LLEQQP